T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 94611..123855
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV252_RS29775 (HV252_29785) | 89801..90676 | + | 876 | WP_060415463 | DUF4942 domain-containing protein | - |
| HV252_RS29780 (HV252_29790) | 91456..91794 | + | 339 | WP_020804855 | hypothetical protein | - |
| HV252_RS29785 (HV252_29795) | 91851..92198 | + | 348 | WP_064182675 | hypothetical protein | - |
| HV252_RS29790 (HV252_29800) | 92287..92517 | + | 231 | WP_060415465 | hypothetical protein | - |
| HV252_RS29795 (HV252_29805) | 92564..93397 | + | 834 | WP_060415466 | N-6 DNA methylase | - |
| HV252_RS29800 (HV252_29810) | 93683..94051 | - | 369 | WP_080848162 | hypothetical protein | - |
| HV252_RS29805 (HV252_29815) | 94046..94588 | + | 543 | WP_060415467 | antirestriction protein | - |
| HV252_RS29810 (HV252_29820) | 94611..95033 | - | 423 | WP_073972322 | transglycosylase SLT domain-containing protein | virB1 |
| HV252_RS29815 (HV252_29825) | 95537..95929 | + | 393 | WP_020805752 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HV252_RS32640 | 96167..96868 | + | 702 | WP_223174962 | hypothetical protein | - |
| HV252_RS29825 (HV252_29835) | 96954..97154 | + | 201 | WP_048289787 | TraY domain-containing protein | - |
| HV252_RS29830 (HV252_29840) | 97223..97591 | + | 369 | WP_064343525 | type IV conjugative transfer system pilin TraA | - |
| HV252_RS29835 (HV252_29845) | 97605..97910 | + | 306 | WP_064343526 | type IV conjugative transfer system protein TraL | traL |
| HV252_RS29840 (HV252_29850) | 97926..98492 | + | 567 | WP_064359954 | type IV conjugative transfer system protein TraE | traE |
| HV252_RS29845 (HV252_29855) | 98479..99213 | + | 735 | WP_064343528 | type-F conjugative transfer system secretin TraK | traK |
| HV252_RS29850 (HV252_29860) | 99213..100634 | + | 1422 | WP_053390199 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HV252_RS29855 (HV252_29865) | 100627..101061 | + | 435 | WP_020322358 | conjugal transfer protein TraP | - |
| HV252_RS29860 (HV252_29870) | 101095..101679 | + | 585 | WP_064343530 | type IV conjugative transfer system lipoprotein TraV | traV |
| HV252_RS29865 (HV252_29875) | 102292..102480 | + | 189 | WP_053390286 | hypothetical protein | - |
| HV252_RS32645 | 102564..102965 | + | 402 | WP_064343532 | hypothetical protein | - |
| HV252_RS29875 (HV252_29885) | 102962..103261 | + | 300 | WP_053390308 | hypothetical protein | - |
| HV252_RS29880 (HV252_29890) | 103349..103732 | + | 384 | WP_042946290 | hypothetical protein | - |
| HV252_RS29885 (HV252_29895) | 103825..106464 | + | 2640 | WP_064343533 | type IV secretion system protein TraC | virb4 |
| HV252_RS29890 (HV252_29900) | 106464..106856 | + | 393 | WP_064343534 | type-F conjugative transfer system protein TrbI | - |
| HV252_RS29895 (HV252_29905) | 106853..107479 | + | 627 | WP_064343535 | type-F conjugative transfer system protein TraW | traW |
| HV252_RS29900 (HV252_29910) | 107523..108482 | + | 960 | WP_229295972 | conjugal transfer pilus assembly protein TraU | traU |
| HV252_RS29905 (HV252_29915) | 108495..109142 | + | 648 | WP_064343536 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HV252_RS29910 (HV252_29920) | 109139..109522 | + | 384 | WP_053390297 | hypothetical protein | - |
| HV252_RS29915 (HV252_29925) | 109519..111474 | + | 1956 | WP_064359956 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HV252_RS29920 (HV252_29930) | 111506..111766 | + | 261 | WP_053390216 | hypothetical protein | - |
| HV252_RS29925 (HV252_29935) | 111759..112370 | + | 612 | WP_053390217 | hypothetical protein | - |
| HV252_RS29930 (HV252_29940) | 112360..112602 | + | 243 | WP_053390218 | conjugal transfer protein TrbE | - |
| HV252_RS29935 (HV252_29945) | 112648..112974 | + | 327 | WP_053390219 | hypothetical protein | - |
| HV252_RS29940 (HV252_29950) | 112995..113747 | + | 753 | WP_053390220 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HV252_RS29945 (HV252_29955) | 113758..113994 | + | 237 | WP_053390221 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV252_RS29950 (HV252_29960) | 113969..114529 | + | 561 | WP_039698500 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HV252_RS29955 (HV252_29965) | 114516..115886 | + | 1371 | WP_075606918 | conjugal transfer pilus assembly protein TraH | traH |
| HV252_RS29960 (HV252_29970) | 115886..118765 | + | 2880 | WP_064386194 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HV252_RS29965 (HV252_29975) | 118782..119450 | + | 669 | WP_128317877 | hypothetical protein | - |
| HV252_RS29970 (HV252_29980) | 119803..120534 | + | 732 | WP_064386198 | conjugal transfer complement resistance protein TraT | - |
| HV252_RS32650 | 120726..121418 | + | 693 | WP_202395549 | hypothetical protein | - |
| HV252_RS29980 (HV252_29990) | 121537..123855 | + | 2319 | WP_075606915 | type IV conjugative transfer system coupling protein TraD | virb4 |