T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 19010..32305
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPF14_RS00070 (pNDM-AB_015) | 14888..15535 | - | 648 | WP_004993315 | recombinase family protein | - |
| HPF14_RS00075 | 15687..15911 | + | 225 | WP_015056389 | hypothetical protein | - |
| HPF14_RS00080 (pNDM-AB_016) | 16095..17807 | + | 1713 | WP_015060705 | zeta toxin family protein | - |
| HPF14_RS00085 (pNDM-AB_017) | 17804..18286 | - | 483 | WP_015060706 | thermonuclease family protein | - |
| HPF14_RS00090 (pNDM-AB_018) | 18486..18947 | - | 462 | WP_015060707 | hypothetical protein | - |
| HPF14_RS00095 (pNDM-AB_019) | 19010..19651 | - | 642 | WP_004999358 | type IV secretion system protein | virB5 |
| HPF14_RS00100 (pNDM-AB_020) | 19648..22359 | - | 2712 | WP_015060708 | VirB4 | virb4 |
| HPF14_RS00105 | 22371..22664 | - | 294 | WP_017480461 | TrbC/VirB2 family protein | virB2 |
| HPF14_RS00110 (pNDM-AB_021) | 22675..23385 | - | 711 | WP_017480462 | lytic transglycosylase domain-containing protein | - |
| HPF14_RS00115 | 23430..23630 | - | 201 | WP_004999346 | hypothetical protein | - |
| HPF14_RS00120 (pNDM-AB_022) | 23649..25166 | - | 1518 | WP_015060710 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HPF14_RS00125 (pNDM-AB_023) | 25163..26416 | - | 1254 | WP_015060711 | lytic transglycosylase domain-containing protein | - |
| HPF14_RS00130 (pNDM-AB_024) | 26492..26944 | - | 453 | WP_004999340 | hypothetical protein | - |
| HPF14_RS00135 | 26948..27277 | - | 330 | WP_004999338 | hypothetical protein | - |
| HPF14_RS00140 (pNDM-AB_025) | 27246..28283 | - | 1038 | WP_015060713 | P-type DNA transfer ATPase VirB11 | virB11 |
| HPF14_RS00145 (pNDM-AB_026) | 28299..29678 | - | 1380 | WP_015472974 | TrbI/VirB10 family protein | virB10 |
| HPF14_RS00150 (pNDM-AB_027) | 29680..30417 | - | 738 | WP_005000435 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HPF14_RS00155 (pNDM-AB_028) | 30432..31220 | - | 789 | WP_005000436 | VirB8/TrbF family protein | virB8 |
| HPF14_RS00160 (pNDM-AB_029) | 31220..32305 | - | 1086 | WP_005000437 | type IV secretion system protein | virB6 |
| HPF14_RS00165 (pNDM-AB_030) | 32313..32732 | - | 420 | WP_005000439 | hypothetical protein | - |
| HPF14_RS00170 (pNDM-AB_031) | 32719..33090 | - | 372 | WP_005000442 | hypothetical protein | - |
| HPF14_RS00175 | 34712..34951 | + | 240 | WP_005000443 | hypothetical protein | - |
| HPF14_RS00180 (pNDM-AB_032) | 34968..35657 | + | 690 | WP_005000446 | ParA family partition ATPase | - |
| HPF14_RS00185 (pNDM-AB_033) | 35654..36058 | + | 405 | WP_005000449 | hypothetical protein | - |