T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 97013..119156
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV312_RS26925 (HV312_26930) | 97013..99319 | - | 2307 | WP_047665855 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HV312_RS27600 | 99393..99488 | - | 96 | Protein_98 | hypothetical protein | - |
| HV312_RS26930 (HV312_26935) | 99681..100412 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| HV312_RS26935 (HV312_26940) | 100602..101129 | - | 528 | WP_047665858 | conjugal transfer protein TraS | - |
| HV312_RS26940 (HV312_26945) | 101135..103984 | - | 2850 | WP_181482102 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HV312_RS26945 (HV312_26950) | 103984..105354 | - | 1371 | WP_087846395 | conjugal transfer pilus assembly protein TraH | traH |
| HV312_RS26950 (HV312_26955) | 105341..105604 | - | 264 | WP_087846397 | hypothetical protein | - |
| HV312_RS26955 (HV312_26960) | 105601..106026 | - | 426 | WP_109910419 | HNH endonuclease signature motif containing protein | - |
| HV312_RS26960 (HV312_26965) | 106030..106233 | - | 204 | WP_087846401 | hypothetical protein | - |
| HV312_RS26965 (HV312_26970) | 106235..106636 | - | 402 | WP_087846403 | hypothetical protein | - |
| HV312_RS26970 (HV312_26975) | 106629..107201 | - | 573 | WP_087846405 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HV312_RS26975 (HV312_26980) | 107173..107412 | - | 240 | WP_009309875 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV312_RS26980 (HV312_26985) | 107423..108175 | - | 753 | WP_087846407 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HV312_RS26985 (HV312_26990) | 108196..108522 | - | 327 | WP_086070807 | hypothetical protein | - |
| HV312_RS26990 (HV312_26995) | 108750..108986 | - | 237 | WP_087846411 | conjugal transfer protein TrbE | - |
| HV312_RS26995 (HV312_27000) | 109018..110973 | - | 1956 | WP_087846413 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HV312_RS27000 (HV312_27005) | 111032..111670 | - | 639 | WP_032456788 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HV312_RS27005 (HV312_27010) | 111683..112672 | - | 990 | WP_009309872 | conjugal transfer pilus assembly protein TraU | traU |
| HV312_RS27010 (HV312_27015) | 112669..113058 | - | 390 | WP_040107935 | hypothetical protein | - |
| HV312_RS27015 (HV312_27020) | 113100..113726 | - | 627 | WP_087846415 | type-F conjugative transfer system protein TraW | traW |
| HV312_RS27020 (HV312_27025) | 113726..114115 | - | 390 | WP_040107933 | type-F conjugative transfer system protein TrbI | - |
| HV312_RS27025 (HV312_27030) | 114115..116754 | - | 2640 | WP_040107932 | type IV secretion system protein TraC | virb4 |
| HV312_RS27030 (HV312_27035) | 116826..117218 | - | 393 | WP_087846417 | hypothetical protein | - |
| HV312_RS27035 (HV312_27040) | 117232..117585 | - | 354 | WP_228725554 | hypothetical protein | - |
| HV312_RS27040 (HV312_27045) | 117565..118533 | + | 969 | WP_181481626 | IS5 family transposase | - |
| HV312_RS27045 (HV312_27050) | 118592..118831 | - | 240 | Protein_122 | TraE/TraK family type IV conjugative transfer system protein | - |
| HV312_RS27050 (HV312_27055) | 118851..119156 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| HV312_RS27055 (HV312_27060) | 119170..119538 | - | 369 | WP_048295882 | type IV conjugative transfer system pilin TraA | - |
| HV312_RS27060 (HV312_27065) | 119592..119963 | - | 372 | WP_004208838 | TraY domain-containing protein | - |
| HV312_RS27065 (HV312_27070) | 120047..120742 | - | 696 | WP_075212577 | transcriptional regulator TraJ family protein | - |
| HV312_RS27070 (HV312_27075) | 120949..121341 | - | 393 | WP_087846435 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HV312_RS27075 (HV312_27080) | 121848..122255 | + | 408 | WP_226615017 | transglycosylase SLT domain-containing protein | - |
| HV312_RS27080 (HV312_27085) | 122293..122823 | - | 531 | WP_087846439 | antirestriction protein | - |