T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 19174..33171
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV088_RS24340 (HV088_24340) | 15019..16452 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| HV088_RS24345 (HV088_24345) | 16551..16823 | + | 273 | Protein_17 | IS1 family transposase | - |
| HV088_RS24350 (HV088_24350) | 16834..17040 | - | 207 | WP_001749967 | hypothetical protein | - |
| HV088_RS24355 (HV088_24355) | 17045..17686 | - | 642 | WP_012561158 | restriction endonuclease | - |
| HV088_RS24360 (HV088_24360) | 17742..18053 | - | 312 | WP_013279382 | hypothetical protein | - |
| HV088_RS24365 (HV088_24365) | 18089..18403 | - | 315 | WP_016338363 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HV088_RS24370 (HV088_24370) | 18400..18744 | - | 345 | WP_012561155 | hypothetical protein | - |
| HV088_RS24375 (HV088_24375) | 18760..19137 | - | 378 | WP_193567606 | H-NS family nucleoid-associated regulatory protein | - |
| HV088_RS24380 (HV088_24380) | 19174..19911 | + | 738 | WP_013279384 | lytic transglycosylase domain-containing protein | virB1 |
| HV088_RS24385 (HV088_24385) | 19920..20201 | + | 282 | WP_016338364 | transcriptional repressor KorA | - |
| HV088_RS24390 (HV088_24390) | 20211..20504 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| HV088_RS24395 (HV088_24395) | 20554..20871 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HV088_RS24400 (HV088_24400) | 21003..23471 | + | 2469 | WP_223669807 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HV088_RS24405 (HV088_24405) | 23489..24202 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| HV088_RS24410 (HV088_24410) | 24210..24437 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| HV088_RS24415 (HV088_24415) | 24453..25493 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| HV088_RS24420 (HV088_24420) | 25623..28520 | - | 2898 | WP_001553819 | Tn3-like element Tn5403 family transposase | - |
| HV088_RS24425 (HV088_24425) | 28615..29220 | + | 606 | WP_000509966 | recombinase family protein | - |
| HV088_RS24860 | 29263..29391 | + | 129 | WP_071882546 | conjugal transfer protein TraN | - |
| HV088_RS24430 (HV088_24430) | 29381..30079 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| HV088_RS24435 (HV088_24435) | 30090..30974 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HV088_RS24440 (HV088_24440) | 30974..32134 | + | 1161 | WP_012561145 | type IV secretion system protein VirB10 | virB10 |
| HV088_RS24445 (HV088_24445) | 32176..33171 | + | 996 | WP_012561144 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HV088_RS24450 (HV088_24450) | 33171..33704 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| HV088_RS24455 (HV088_24455) | 33877..34191 | - | 315 | WP_000091613 | hypothetical protein | - |
| HV088_RS24460 (HV088_24460) | 34446..34802 | - | 357 | WP_000215515 | cupin domain-containing protein | - |
| HV088_RS24465 (HV088_24465) | 34792..35193 | - | 402 | WP_001293886 | DUF86 domain-containing protein | - |
| HV088_RS24470 (HV088_24470) | 35190..35480 | - | 291 | WP_001247892 | nucleotidyltransferase | - |