T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 507..16905
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS982_RS00010 | 208..444 | - | 237 | WP_000089855 | H-NS histone family protein | - |
| HS982_RS00015 (D726_p4001) | 507..1247 | + | 741 | WP_000815895 | lytic transglycosylase domain-containing protein | virB1 |
| HS982_RS00020 (D726_p4002) | 1270..1587 | + | 318 | WP_001267114 | hypothetical protein | - |
| HS982_RS00025 (D726_p4003) | 1571..1861 | + | 291 | WP_015345248 | TrbC/VirB2 family protein | virB2 |
| HS982_RS00030 (D726_p4004) | 1914..2228 | + | 315 | WP_024249950 | VirB3 family type IV secretion system protein | virB3 |
| HS982_RS00035 (D726_p4005) | 2228..4858 | + | 2631 | WP_024249951 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HS982_RS00040 (D726_p4006) | 4868..5575 | + | 708 | WP_015345224 | type IV secretion system protein | virB5 |
| HS982_RS00045 | 5579..5815 | + | 237 | WP_000733633 | EexN family lipoprotein | - |
| HS982_RS00050 (D726_p4007) | 5834..6877 | + | 1044 | WP_000885742 | type IV secretion system protein | virB6 |
| HS982_RS00055 | 6927..7142 | + | 216 | WP_087871672 | hypothetical protein | - |
| HS982_RS00060 (D726_p4008) | 7145..7861 | + | 717 | WP_000914645 | type IV secretion system protein | virB8 |
| HS982_RS00065 (D726_p4009) | 7864..8751 | + | 888 | WP_000744355 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HS982_RS00070 (D726_p4010) | 8748..9902 | + | 1155 | WP_015345225 | type IV secretion system protein VirB10 | virB10 |
| HS982_RS00075 (D726_p4011) | 9895..10926 | + | 1032 | WP_000138004 | P-type DNA transfer ATPase VirB11 | virB11 |
| HS982_RS00080 (D726_p4012) | 10889..11443 | + | 555 | WP_000616063 | phospholipase D family protein | - |
| HS982_RS00085 (D726_p4013) | 11444..11938 | + | 495 | WP_015345227 | GNAT family protein | - |
| HS982_RS00090 | 11950..12144 | + | 195 | WP_024249955 | hypothetical protein | - |
| HS982_RS00095 (D726_p4014) | 12422..15325 | - | 2904 | WP_015345228 | MobF family relaxase | - |
| HS982_RS00100 (D726_p4015) | 15328..16905 | - | 1578 | WP_001001035 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HS982_RS00105 (D726_p4016) | 16898..17278 | - | 381 | WP_015345229 | hypothetical protein | - |
| HS982_RS00110 (D726_p4017) | 17732..18166 | + | 435 | WP_015345230 | hypothetical protein | - |
| HS982_RS00115 (D726_p4018) | 18179..18889 | + | 711 | WP_000686338 | StbB family protein | - |
| HS982_RS00120 (D726_p4019) | 18891..19259 | + | 369 | WP_015345231 | plasmid stabilization protein StbC | - |
| HS982_RS00125 (D726_p4020) | 19451..20221 | + | 771 | WP_015345232 | SprT-like domain-containing protein | - |
| HS982_RS00130 | 20262..20450 | - | 189 | WP_001001010 | hypothetical protein | - |
| HS982_RS00135 | 20455..20712 | - | 258 | WP_021536820 | hypothetical protein | - |
| HS982_RS00140 | 20785..20940 | - | 156 | WP_021536821 | hypothetical protein | - |
| HS982_RS00145 | 21140..21382 | - | 243 | WP_024249959 | hypothetical protein | - |
| HS982_RS00150 | 21437..21724 | - | 288 | WP_001098466 | hypothetical protein | - |