T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 29095..54886
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HB638_RS23460 (HB638_23450) | 28461..28688 | + | 228 | WP_039023146 | toxin-antitoxin system antitoxin VapB | - |
| HB638_RS23465 (HB638_23455) | 28688..29086 | + | 399 | WP_039023147 | type II toxin-antitoxin system VapC family toxin | - |
| HB638_RS23470 (HB638_23460) | 29095..31338 | - | 2244 | WP_167317319 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HB638_RS23475 (HB638_23465) | 31591..32322 | - | 732 | WP_000850422 | conjugal transfer complement resistance protein TraT | - |
| HB638_RS23480 (HB638_23470) | 32354..32851 | - | 498 | WP_000605862 | entry exclusion protein | - |
| HB638_RS23485 (HB638_23475) | 32870..35689 | - | 2820 | WP_039023149 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HB638_RS23490 (HB638_23480) | 35686..37059 | - | 1374 | WP_039023150 | conjugal transfer pilus assembly protein TraH | traH |
| HB638_RS23495 (HB638_23485) | 37059..37421 | - | 363 | WP_071550055 | P-type conjugative transfer protein TrbJ | - |
| HB638_RS23500 (HB638_23490) | 37351..37896 | - | 546 | WP_016236310 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HB638_RS23505 (HB638_23495) | 37883..38167 | - | 285 | WP_000624110 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HB638_RS23510 (HB638_23500) | 38286..38633 | - | 348 | WP_001287894 | conjugal transfer protein TrbA | - |
| HB638_RS23515 (HB638_23505) | 38649..39392 | - | 744 | WP_001030376 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HB638_RS23520 (HB638_23510) | 39385..39642 | - | 258 | WP_039023152 | conjugal transfer protein TrbE | - |
| HB638_RS23525 (HB638_23515) | 39669..41477 | - | 1809 | WP_039023153 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HB638_RS23530 (HB638_23520) | 41474..42112 | - | 639 | WP_001553832 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HB638_RS23535 (HB638_23525) | 42121..43113 | - | 993 | WP_001553833 | conjugal transfer pilus assembly protein TraU | traU |
| HB638_RS23540 (HB638_23530) | 43110..43742 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| HB638_RS23545 (HB638_23535) | 43739..44125 | - | 387 | WP_000099690 | type-F conjugative transfer system protein TrbI | - |
| HB638_RS23550 (HB638_23540) | 44122..46749 | - | 2628 | WP_001064264 | type IV secretion system protein TraC | virb4 |
| HB638_RS23555 (HB638_23545) | 46909..47130 | - | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| HB638_RS23560 (HB638_23550) | 47265..47780 | - | 516 | WP_000809832 | type IV conjugative transfer system lipoprotein TraV | traV |
| HB638_RS23565 (HB638_23555) | 47777..48028 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| HB638_RS24445 | 48021..48341 | - | 321 | Protein_50 | conjugal transfer protein TrbD | - |
| HB638_RS23580 (HB638_23570) | 48328..48918 | - | 591 | WP_000002787 | conjugal transfer pilus-stabilizing protein TraP | - |
| HB638_RS23585 (HB638_23575) | 48908..50335 | - | 1428 | WP_001553836 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HB638_RS23590 (HB638_23580) | 50335..51063 | - | 729 | WP_001230813 | type-F conjugative transfer system secretin TraK | traK |
| HB638_RS23595 (HB638_23585) | 51050..51616 | - | 567 | WP_000399790 | type IV conjugative transfer system protein TraE | traE |
| HB638_RS23600 (HB638_23590) | 51638..51949 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| HB638_RS23605 (HB638_23595) | 51964..52329 | - | 366 | WP_000340282 | type IV conjugative transfer system pilin TraA | - |
| HB638_RS23610 (HB638_23600) | 52372..52587 | - | 216 | WP_001352842 | conjugal transfer relaxosome protein TraY | - |
| HB638_RS23615 (HB638_23605) | 52723..53370 | - | 648 | WP_000332520 | conjugal transfer transcriptional regulator TraJ | - |
| HB638_RS23620 (HB638_23610) | 53561..53944 | - | 384 | WP_001063020 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HB638_RS23625 (HB638_23615) | 54314..54886 | + | 573 | WP_000949660 | transglycosylase SLT domain-containing protein | virB1 |
| HB638_RS23630 (HB638_23620) | 55182..56003 | - | 822 | WP_001234465 | DUF932 domain-containing protein | - |
| HB638_RS23635 (HB638_23625) | 56122..56409 | - | 288 | WP_000107242 | hypothetical protein | - |
| HB638_RS24105 | 56434..56640 | - | 207 | WP_000275854 | hypothetical protein | - |
| HB638_RS24450 | 56710..57007 | + | 298 | Protein_64 | hypothetical protein | - |
| HB638_RS23645 (HB638_23635) | 57308..57433 | - | 126 | WP_096937776 | type I toxin-antitoxin system Hok family toxin | - |
| HB638_RS24455 | 57375..57524 | - | 150 | Protein_66 | DUF5431 family protein | - |
| HB638_RS23655 (HB638_23645) | 59144..59249 | - | 106 | Protein_68 | plasmid SOS inhibition protein A | - |
| HB638_RS23660 (HB638_23650) | 59404..59721 | + | 318 | Protein_69 | IS110 family transposase | - |