T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 894..8278
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HB636_RS28945 (HB636_28960) | 69..545 | - | 477 | WP_000549587 | hypothetical protein | - |
| HB636_RS28950 (HB636_28965) | 538..759 | - | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| HB636_RS28955 (HB636_28970) | 894..1409 | - | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| HB636_RS28960 (HB636_28975) | 1406..1726 | - | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| HB636_RS28965 (HB636_28980) | 1713..2279 | - | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| HB636_RS28970 (HB636_28985) | 2269..3720 | - | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HB636_RS28975 (HB636_28990) | 3720..4448 | - | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| HB636_RS28980 (HB636_28995) | 4435..5001 | - | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| HB636_RS28985 (HB636_29000) | 5023..5334 | - | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| HB636_RS28990 (HB636_29005) | 5349..5708 | - | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| HB636_RS28995 (HB636_29010) | 5741..5968 | - | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| HB636_RS29000 (HB636_29015) | 6105..6776 | - | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| HB636_RS29005 (HB636_29020) | 6970..7353 | - | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HB636_RS29010 (HB636_29025) | 7688..8278 | + | 591 | WP_000252683 | transglycosylase SLT domain-containing protein | virB1 |
| HB636_RS29015 (HB636_29030) | 8575..9396 | - | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| HB636_RS29020 (HB636_29035) | 9507..9803 | - | 297 | WP_001272251 | hypothetical protein | - |
| HB636_RS29025 (HB636_29040) | 9873..10577 | + | 705 | WP_155367594 | IS6-like element IS26 family transposase | - |
| HB636_RS29030 (HB636_29045) | 10632..11498 | - | 867 | Protein_17 | class 1 integron integrase IntI1 | - |
| HB636_RS29035 (HB636_29050) | 11643..12140 | + | 498 | WP_001083725 | trimethoprim-resistant dihydrofolate reductase DfrA12 | - |
| HB636_RS29040 (HB636_29055) | 12346..13050 | - | 705 | WP_155367594 | IS6-like element IS26 family transposase | - |