T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 41053..70289
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FA958_RS28400 (FA958_28590) | 36256..36975 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| FA958_RS30330 | 37197..37346 | + | 150 | Protein_49 | plasmid maintenance protein Mok | - |
| FA958_RS28405 (FA958_28595) | 37288..37413 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| FA958_RS30050 | 37732..38028 | - | 297 | Protein_51 | hypothetical protein | - |
| FA958_RS28415 (FA958_28615) | 38328..38624 | + | 297 | WP_001272251 | hypothetical protein | - |
| FA958_RS28420 (FA958_28620) | 38805..39785 | + | 981 | WP_000019473 | IS5-like element ISKpn26 family transposase | - |
| FA958_RS28425 (FA958_28625) | 39935..40756 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| FA958_RS28430 (FA958_28630) | 41053..41700 | - | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| FA958_RS28435 (FA958_28635) | 41977..42360 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FA958_RS28440 (FA958_28640) | 42551..43237 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| FA958_RS28445 (FA958_28645) | 43331..43558 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| FA958_RS28450 (FA958_28650) | 43592..43957 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| FA958_RS28455 (FA958_28655) | 43972..44283 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| FA958_RS28460 (FA958_28660) | 44305..44871 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| FA958_RS28465 (FA958_28665) | 44858..45586 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| FA958_RS28470 (FA958_28670) | 45586..47013 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| FA958_RS28475 (FA958_28675) | 47003..47593 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| FA958_RS28480 (FA958_28680) | 47580..47777 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| FA958_RS28485 (FA958_28685) | 47789..48040 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| FA958_RS28490 (FA958_28690) | 48037..48552 | + | 516 | WP_062955122 | type IV conjugative transfer system lipoprotein TraV | traV |
| FA958_RS28495 (FA958_28695) | 48687..48908 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| FA958_RS28500 (FA958_28700) | 49068..51695 | + | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| FA958_RS28505 (FA958_28705) | 51692..52078 | + | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| FA958_RS28510 (FA958_28710) | 52075..52707 | + | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| FA958_RS28515 (FA958_28715) | 52704..53696 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| FA958_RS28520 (FA958_28720) | 53723..54031 | + | 309 | WP_000412447 | hypothetical protein | - |
| FA958_RS28525 (FA958_28725) | 54094..54615 | + | 522 | WP_015059014 | hypothetical protein | - |
| FA958_RS28530 (FA958_28730) | 54642..55280 | + | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| FA958_RS28535 (FA958_28735) | 55277..55648 | + | 372 | WP_000056336 | hypothetical protein | - |
| FA958_RS28540 (FA958_28740) | 55674..56096 | + | 423 | WP_001229309 | HNH endonuclease signature motif containing protein | - |
| FA958_RS28545 (FA958_28745) | 56093..57943 | + | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| FA958_RS28550 (FA958_28750) | 57970..58227 | + | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| FA958_RS28555 (FA958_28755) | 58214..58963 | + | 750 | WP_072354014 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| FA958_RS28560 (FA958_28760) | 59124..59360 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FA958_RS28565 (FA958_28765) | 59347..59892 | + | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| FA958_RS28570 (FA958_28770) | 59882..60196 | + | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| FA958_RS28575 (FA958_28775) | 60150..60542 | + | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| FA958_RS28580 (FA958_28780) | 60529..61902 | + | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| FA958_RS28585 (FA958_28785) | 61899..64715 | + | 2817 | WP_015059018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| FA958_RS28590 (FA958_28790) | 64748..65077 | + | 330 | WP_227650653 | hypothetical protein | - |
| FA958_RS28595 (FA958_28800) | 65095..66063 | + | 969 | WP_013362812 | IS5-like element IS903B family transposase | - |
| FA958_RS28600 (FA958_28810) | 66360..67091 | + | 732 | WP_021559024 | conjugal transfer complement resistance protein TraT | - |
| FA958_RS28605 (FA958_28815) | 67294..68031 | + | 738 | WP_015059020 | hypothetical protein | - |
| FA958_RS28610 (FA958_28820) | 68082..70289 | + | 2208 | WP_021573169 | type IV conjugative transfer system coupling protein TraD | virb4 |