T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 61000..87387
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COO54_RS23885 (COO54_23775) | 56156..58153 | + | 1998 | WP_117338888 | ParB/RepB/Spo0J family partition protein | - |
| COO54_RS23890 (COO54_23780) | 58193..58627 | + | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| COO54_RS23895 (COO54_23785) | 58624..59361 | + | 738 | WP_117338889 | plasmid SOS inhibition protein A | - |
| COO54_RS24255 | 59610..59768 | + | 159 | WP_001704449 | hypothetical protein | - |
| COO54_RS23900 (COO54_23790) | 59871..60689 | + | 819 | Protein_71 | DUF932 domain-containing protein | - |
| COO54_RS23905 (COO54_23795) | 61000..61470 | - | 471 | WP_042828200 | transglycosylase SLT domain-containing protein | virB1 |
| COO54_RS23915 (COO54_23805) | 61886..62266 | + | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| COO54_RS23920 (COO54_23810) | 62459..63145 | + | 687 | WP_085376305 | PAS domain-containing protein | - |
| COO54_RS23925 (COO54_23815) | 63239..63466 | + | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| COO54_RS23930 (COO54_23820) | 63508..63870 | + | 363 | WP_001274202 | type IV conjugative transfer system pilin TraA | - |
| COO54_RS23935 (COO54_23825) | 63885..64196 | + | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| COO54_RS23940 (COO54_23830) | 64218..64784 | + | 567 | WP_058215155 | type IV conjugative transfer system protein TraE | traE |
| COO54_RS23945 (COO54_23835) | 64771..65511 | + | 741 | WP_117338891 | type-F conjugative transfer system secretin TraK | traK |
| COO54_RS23950 (COO54_23840) | 65511..66932 | + | 1422 | WP_117338892 | F-type conjugal transfer pilus assembly protein TraB | traB |
| COO54_RS23955 (COO54_23845) | 66922..67518 | + | 597 | WP_047593686 | conjugal transfer pilus-stabilizing protein TraP | - |
| COO54_RS23960 (COO54_23850) | 67496..67741 | + | 246 | WP_117338893 | DUF2689 domain-containing protein | virb4 |
| COO54_RS23965 (COO54_23855) | 67738..68253 | + | 516 | WP_085376303 | type IV conjugative transfer system lipoprotein TraV | traV |
| COO54_RS23970 (COO54_23860) | 68388..68609 | + | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| COO54_RS23975 (COO54_23865) | 68602..69069 | + | 468 | WP_000549562 | hypothetical protein | - |
| COO54_RS23980 (COO54_23870) | 69066..69449 | + | 384 | WP_117338894 | hypothetical protein | - |
| COO54_RS23985 (COO54_23875) | 69465..72113 | + | 2649 | WP_117338895 | type IV secretion system protein TraC | virb4 |
| COO54_RS23990 (COO54_23880) | 72088..72474 | + | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| COO54_RS23995 (COO54_23885) | 72471..73103 | + | 633 | WP_079967495 | type-F conjugative transfer system protein TraW | traW |
| COO54_RS24000 (COO54_23890) | 73100..74092 | + | 993 | WP_000833319 | conjugal transfer pilus assembly protein TraU | traU |
| COO54_RS24005 (COO54_23895) | 74111..74419 | + | 309 | WP_080235917 | hypothetical protein | - |
| COO54_RS24010 (COO54_23900) | 74404..75042 | + | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| COO54_RS24015 (COO54_23905) | 75079..75498 | + | 420 | WP_001229397 | HNH endonuclease signature motif containing protein | - |
| COO54_RS24020 (COO54_23910) | 75495..77321 | + | 1827 | WP_117338896 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| COO54_RS24025 (COO54_23915) | 77332..77547 | + | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| COO54_RS24030 (COO54_23920) | 77559..78308 | + | 750 | WP_117338897 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| COO54_RS24035 (COO54_23925) | 78522..78815 | + | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| COO54_RS24040 (COO54_23930) | 78802..79350 | + | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| COO54_RS24045 (COO54_23935) | 79340..80722 | + | 1383 | WP_117338898 | conjugal transfer pilus assembly protein TraH | traH |
| COO54_RS24050 (COO54_23940) | 80719..83541 | + | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| COO54_RS24055 (COO54_23945) | 83557..84051 | + | 495 | WP_077916534 | entry exclusion protein | - |
| COO54_RS24060 (COO54_23950) | 84087..84818 | + | 732 | WP_031608647 | conjugal transfer complement resistance protein TraT | - |
| COO54_RS24065 (COO54_23955) | 85195..87387 | + | 2193 | WP_117338899 | type IV conjugative transfer system coupling protein TraD | virb4 |