T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 81304..103717
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHC41_RS26585 (CHC41_26580) | 76366..77433 | + | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |
| CHC41_RS26590 (CHC41_26585) | 77433..77870 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| CHC41_RS26595 (CHC41_26590) | 77884..79566 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| CHC41_RS26600 (CHC41_26595) | 79559..80854 | + | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| CHC41_RS26605 (CHC41_26600) | 80841..81293 | + | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| CHC41_RS26610 (CHC41_26605) | 81304..82857 | + | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| CHC41_RS26615 (CHC41_26610) | 82870..83967 | + | 1098 | WP_001208805 | type II secretion system F family protein | - |
| CHC41_RS26620 (CHC41_26615) | 83985..84599 | + | 615 | WP_000959786 | type 4 pilus major pilin | - |
| CHC41_RS26625 (CHC41_26620) | 84609..85169 | + | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| CHC41_RS26630 (CHC41_26625) | 85154..85810 | + | 657 | WP_001193553 | prepilin peptidase | - |
| CHC41_RS26635 (CHC41_26630) | 85810..87231 | + | 1422 | WP_114050687 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CHC41_RS27515 (CHC41_26655) | 88479..88794 | - | 316 | Protein_102 | shufflon protein C | - |
| CHC41_RS26665 (CHC41_26660) | 88793..89947 | + | 1155 | WP_001139958 | site-specific integrase | - |
| CHC41_RS26670 (CHC41_26665) | 90098..90922 | + | 825 | WP_114050688 | conjugal transfer protein TraE | traE |
| CHC41_RS26675 (CHC41_26670) | 91008..92210 | + | 1203 | WP_114050689 | conjugal transfer protein TraF | - |
| CHC41_RS26680 (CHC41_26675) | 92270..92854 | + | 585 | WP_114050690 | histidine phosphatase family protein | - |
| CHC41_RS26685 (CHC41_26680) | 93249..93707 | + | 459 | WP_114050691 | IncI1-type conjugal transfer lipoprotein TraH | - |
| CHC41_RS26690 (CHC41_26685) | 93704..94522 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| CHC41_RS26695 (CHC41_26690) | 94519..95667 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| CHC41_RS26700 (CHC41_26695) | 95664..95954 | + | 291 | WP_001372180 | hypothetical protein | traK |
| CHC41_RS26705 (CHC41_26700) | 95969..96520 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| CHC41_RS26710 (CHC41_26705) | 96610..100377 | + | 3768 | WP_114050692 | LPD7 domain-containing protein | - |
| CHC41_RS26715 (CHC41_26710) | 100395..100742 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| CHC41_RS26720 (CHC41_26715) | 100739..101431 | + | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| CHC41_RS26725 (CHC41_26720) | 101442..102425 | + | 984 | WP_114050693 | IncI1-type conjugal transfer protein TraN | traN |
| CHC41_RS26730 (CHC41_26725) | 102428..103717 | + | 1290 | WP_001272000 | conjugal transfer protein TraO | traO |