T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1..20173
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHC41_RS26060 (CHC41_26055) | 1..528 | + | 528 | WP_114050680 | conjugal transfer protein TraQ | traQ |
| CHC41_RS26065 (CHC41_26060) | 579..983 | + | 405 | WP_000086959 | IncI1-type conjugal transfer protein TraR | traR |
| CHC41_RS26070 (CHC41_26065) | 1047..1235 | + | 189 | WP_114050681 | putative conjugal transfer protein TraS | - |
| CHC41_RS26075 (CHC41_26070) | 1219..2019 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| CHC41_RS26080 (CHC41_26075) | 2109..5153 | + | 3045 | WP_001024782 | IncI1-type conjugal transfer protein TraU | traU |
| CHC41_RS26085 (CHC41_26080) | 5153..5767 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| CHC41_RS26090 (CHC41_26085) | 5734..6936 | + | 1203 | WP_114050682 | IncI1-type conjugal transfer protein TraW | traW |
| CHC41_RS26095 (CHC41_26090) | 6965..7549 | + | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| CHC41_RS26100 (CHC41_26095) | 7646..9799 | + | 2154 | Protein_9 | IncI1-type conjugal transfer membrane protein TraY | - |
| CHC41_RS26105 (CHC41_26100) | 9880..10494 | + | 615 | WP_000578649 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CHC41_RS26110 (CHC41_26105) | 10592..10801 | + | 210 | WP_001140545 | hemolysin expression modulator Hha | - |
| CHC41_RS27050 | 11010..11186 | + | 177 | WP_001054900 | hypothetical protein | - |
| CHC41_RS26125 (CHC41_26120) | 12110..12361 | + | 252 | WP_001291965 | hypothetical protein | - |
| CHC41_RS26130 (CHC41_26125) | 12433..12585 | - | 153 | WP_001303307 | Hok/Gef family protein | - |
| CHC41_RS26135 (CHC41_26130) | 13030..13239 | + | 210 | WP_001140545 | hemolysin expression modulator Hha | - |
| CHC41_RS27055 | 13448..13624 | + | 177 | WP_001054900 | hypothetical protein | - |
| CHC41_RS26150 (CHC41_26145) | 14548..14799 | + | 252 | WP_001291965 | hypothetical protein | - |
| CHC41_RS26155 (CHC41_26150) | 14871..15023 | - | 153 | WP_001303307 | Hok/Gef family protein | - |
| CHC41_RS26160 (CHC41_26155) | 15315..16523 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| CHC41_RS26165 (CHC41_26160) | 16542..17612 | + | 1071 | WP_114050683 | IncI1-type conjugal transfer protein TrbB | trbB |
| CHC41_RS26170 (CHC41_26165) | 17605..18967 | + | 1363 | Protein_21 | conjugal transfer protein TrbC | - |
| CHC41_RS26180 (CHC41_26175) | 19103..20173 | + | 1071 | WP_023233614 | IncI1-type conjugal transfer protein TrbB | trbB |
| CHC41_RS27370 | 20166..20783 | + | 618 | Protein_23 | conjugal transfer protein TrbC | - |
| CHC41_RS26185 (CHC41_26180) | 20864..22457 | + | 1594 | WP_240197824 | conjugal transfer protein TrbC | - |
| CHC41_RS26190 (CHC41_26185) | 22645..23199 | - | 555 | WP_023233612 | GNAT family N-acetyltransferase | - |
| CHC41_RS26195 (CHC41_26190) | 23183..23506 | - | 324 | WP_001419663 | DUF1778 domain-containing protein | - |