T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43894..85047
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHE40_RS24410 (CHE40_24405) | 41610..43901 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| CHE40_RS24415 (CHE40_24410) | 43894..44964 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| CHE40_RS24420 (CHE40_24415) | 44983..46191 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| CHE40_RS24425 (CHE40_24420) | 46483..46635 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| CHE40_RS24430 (CHE40_24425) | 46707..46958 | - | 252 | WP_001291965 | hypothetical protein | - |
| CHE40_RS24965 | 47882..48058 | - | 177 | WP_001054900 | hypothetical protein | - |
| CHE40_RS24445 (CHE40_24440) | 48450..48659 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| CHE40_RS24450 (CHE40_24445) | 48731..49393 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CHE40_RS24455 (CHE40_24450) | 49464..51632 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| CHE40_RS24460 (CHE40_24455) | 51729..52313 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| CHE40_RS24465 (CHE40_24460) | 52342..53544 | - | 1203 | WP_001697941 | IncI1-type conjugal transfer protein TraW | traW |
| CHE40_RS24470 (CHE40_24465) | 53511..54125 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| CHE40_RS24475 (CHE40_24470) | 54125..57169 | - | 3045 | WP_010891269 | IncI1-type conjugal transfer protein TraU | traU |
| CHE40_RS24480 (CHE40_24475) | 57259..58059 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| CHE40_RS24485 (CHE40_24480) | 58043..58231 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| CHE40_RS24490 (CHE40_24485) | 58295..58699 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| CHE40_RS24495 (CHE40_24490) | 58750..59277 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| CHE40_RS24500 (CHE40_24495) | 59277..59981 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| CHE40_RS24505 (CHE40_24500) | 59981..61270 | - | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| CHE40_RS24510 (CHE40_24505) | 61273..62256 | - | 984 | WP_001191879 | IncI1-type conjugal transfer protein TraN | traN |
| CHE40_RS24515 (CHE40_24510) | 62267..62959 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| CHE40_RS24520 (CHE40_24515) | 62956..63303 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| CHE40_RS24525 (CHE40_24520) | 63321..67088 | - | 3768 | WP_010891270 | LPD7 domain-containing protein | - |
| CHE40_RS24530 (CHE40_24525) | 67178..67729 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| CHE40_RS24535 (CHE40_24530) | 67744..68034 | - | 291 | WP_001299214 | hypothetical protein | traK |
| CHE40_RS24540 (CHE40_24535) | 68031..69179 | - | 1149 | WP_052979471 | plasmid transfer ATPase TraJ | virB11 |
| CHE40_RS24545 (CHE40_24540) | 69176..69994 | - | 819 | WP_000646095 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| CHE40_RS24550 (CHE40_24545) | 69991..70449 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| CHE40_RS24555 (CHE40_24550) | 70844..71428 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| CHE40_RS24560 (CHE40_24555) | 71488..72690 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| CHE40_RS24570 (CHE40_24565) | 72842..73480 | + | 639 | WP_161477592 | IS4 family transposase | - |
| CHE40_RS24575 (CHE40_24570) | 73365..74503 | - | 1139 | Protein_83 | IS3-like element ISEc52 family transposase | - |
| CHE40_RS24580 (CHE40_24575) | 74563..75303 | + | 741 | Protein_84 | IS4-like element ISVsa5 family transposase | - |
| CHE40_RS24585 (CHE40_24580) | 75367..76191 | - | 825 | WP_114051253 | conjugal transfer protein TraE | traE |
| CHE40_RS24590 (CHE40_24585) | 76342..77496 | - | 1155 | WP_001139958 | site-specific integrase | - |
| CHE40_RS25355 | 77495..77848 | + | 354 | WP_001393368 | hypothetical protein | - |
| CHE40_RS25535 (CHE40_24620) | 78912..79133 | + | 222 | Protein_88 | prepilin | - |
| CHE40_RS24630 (CHE40_24625) | 79130..80566 | - | 1437 | WP_000527428 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CHE40_RS24635 (CHE40_24630) | 80554..81210 | - | 657 | WP_001193549 | A24 family peptidase | - |
| CHE40_RS24640 (CHE40_24635) | 81195..81755 | - | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| CHE40_RS24645 (CHE40_24640) | 81765..82379 | - | 615 | WP_000908226 | type 4 pilus major pilin | - |
| CHE40_RS24650 (CHE40_24645) | 82396..83481 | - | 1086 | WP_001208802 | type II secretion system F family protein | - |
| CHE40_RS24655 (CHE40_24650) | 83494..85047 | - | 1554 | WP_000362206 | ATPase, T2SS/T4P/T4SS family | virB11 |
| CHE40_RS24660 (CHE40_24655) | 85058..85510 | - | 453 | WP_001247337 | type IV pilus biogenesis protein PilP | - |
| CHE40_RS24665 (CHE40_24660) | 85497..86792 | - | 1296 | WP_000752780 | type 4b pilus protein PilO2 | - |
| CHE40_RS24670 (CHE40_24665) | 86785..88467 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| CHE40_RS24675 (CHE40_24670) | 88481..88918 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| CHE40_RS24680 (CHE40_24675) | 88918..89985 | - | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |