T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 41017..77156
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHD10_RS23625 (CHD10_23625) | 38733..41024 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| CHD10_RS23630 (CHD10_23630) | 41017..42087 | - | 1071 | WP_000151577 | IncI1-type conjugal transfer protein TrbB | trbB |
| CHD10_RS23635 (CHD10_23635) | 42106..43314 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| CHD10_RS24300 | 43605..43898 | - | 294 | WP_240195195 | hypothetical protein | - |
| CHD10_RS24340 | 45112..45207 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| CHD10_RS24055 | 45272..45448 | - | 177 | WP_001054904 | hypothetical protein | - |
| CHD10_RS23645 (CHD10_23645) | 45840..46049 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| CHD10_RS23650 (CHD10_23650) | 46121..46771 | - | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CHD10_RS23655 (CHD10_23655) | 46845..49013 | - | 2169 | WP_000698357 | DotA/TraY family protein | traY |
| CHD10_RS23660 (CHD10_23660) | 49110..49694 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| CHD10_RS23665 (CHD10_23665) | 49723..50925 | - | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| CHD10_RS23670 (CHD10_23670) | 50892..51506 | - | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| CHD10_RS23675 (CHD10_23675) | 51506..54550 | - | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| CHD10_RS23680 (CHD10_23680) | 54640..55440 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| CHD10_RS23685 (CHD10_23685) | 55424..55612 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| CHD10_RS23690 (CHD10_23690) | 55676..56080 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| CHD10_RS23695 (CHD10_23695) | 56131..56658 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| CHD10_RS23700 (CHD10_23700) | 56658..57362 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| CHD10_RS23705 (CHD10_23705) | 57362..58651 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| CHD10_RS23710 (CHD10_23710) | 58654..59637 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| CHD10_RS23715 (CHD10_23715) | 59648..60340 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| CHD10_RS23720 (CHD10_23720) | 60337..60684 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| CHD10_RS23725 (CHD10_23725) | 60702..64469 | - | 3768 | WP_001141542 | LPD7 domain-containing protein | - |
| CHD10_RS23730 (CHD10_23730) | 64559..65110 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| CHD10_RS23735 (CHD10_23735) | 65125..65415 | - | 291 | WP_001299214 | hypothetical protein | traK |
| CHD10_RS23740 (CHD10_23740) | 65412..66560 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| CHD10_RS23745 (CHD10_23745) | 66557..67375 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| CHD10_RS23750 (CHD10_23750) | 67372..67830 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| CHD10_RS23755 (CHD10_23755) | 68225..68809 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| CHD10_RS23760 (CHD10_23760) | 68869..70071 | - | 1203 | WP_000976348 | conjugal transfer protein TraF | - |
| CHD10_RS23765 (CHD10_23765) | 70157..70981 | - | 825 | WP_001238942 | conjugal transfer protein TraE | traE |
| CHD10_RS23770 (CHD10_23770) | 71189..71314 | + | 126 | Protein_79 | RNA-guided endonuclease TnpB family protein | - |
| CHD10_RS23775 (CHD10_23775) | 71371..72663 | - | 1293 | WP_001350014 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CHD10_RS23780 (CHD10_23780) | 72663..73319 | - | 657 | WP_001193549 | A24 family peptidase | - |
| CHD10_RS23785 (CHD10_23785) | 73304..73864 | - | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| CHD10_RS23790 (CHD10_23790) | 73874..74488 | - | 615 | WP_000908226 | type 4 pilus major pilin | - |
| CHD10_RS23795 (CHD10_23795) | 74505..75590 | - | 1086 | WP_001208802 | type II secretion system F family protein | - |
| CHD10_RS23800 (CHD10_23800) | 75603..77156 | - | 1554 | WP_000362206 | ATPase, T2SS/T4P/T4SS family | virB11 |
| CHD10_RS23805 (CHD10_23805) | 77167..77619 | - | 453 | WP_001247331 | type IV pilus biogenesis protein PilP | - |
| CHD10_RS23810 (CHD10_23810) | 77606..78901 | - | 1296 | WP_001545757 | type 4b pilus protein PilO2 | - |
| CHD10_RS23815 (CHD10_23815) | 78894..80576 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| CHD10_RS23820 (CHD10_23820) | 80590..81027 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| CHD10_RS23825 (CHD10_23825) | 81027..82094 | - | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |