T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 239453..248660
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AV984_RS26340 | 236743..236904 | - | 162 | WP_001371949 | hypothetical protein | - |
| AV984_RS25560 (AV984_25560) | 239453..242134 | - | 2682 | WP_000387412 | TraC family protein | virb4 |
| AV984_RS25565 (AV984_25565) | 242143..243093 | - | 951 | WP_001022588 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| AV984_RS25570 (AV984_25570) | 243103..243855 | - | 753 | WP_182911723 | protein-disulfide isomerase HtdT | - |
| AV984_RS25575 (AV984_25575) | 243974..244456 | - | 483 | WP_000377632 | hypothetical protein | - |
| AV984_RS25580 (AV984_25580) | 244464..245819 | - | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| AV984_RS25585 (AV984_25585) | 245809..246270 | - | 462 | WP_000521242 | plasmid transfer protein HtdO | - |
| AV984_RS25590 (AV984_25590) | 246272..247543 | - | 1272 | WP_000592092 | type-F conjugative transfer system secretin TraK | traK |
| AV984_RS25595 (AV984_25595) | 247543..248331 | - | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| AV984_RS25600 (AV984_25600) | 248343..248693 | - | 351 | WP_001447770 | type IV conjugative transfer system protein TraL | - |
| AV984_RS25605 (AV984_25605) | 248711..249064 | - | 354 | WP_000423602 | hypothetical protein | - |
| AV984_RS25615 (AV984_25615) | 250213..251088 | - | 876 | WP_000594611 | RepB family plasmid replication initiator protein | - |
| AV984_RS25620 (AV984_25620) | 251565..252617 | + | 1053 | WP_001065778 | hypothetical protein | - |
| AV984_RS25625 (AV984_25625) | 252637..252837 | + | 201 | WP_000594930 | hypothetical protein | - |
| AV984_RS25630 (AV984_25630) | 252834..253550 | + | 717 | WP_000838219 | zinc finger-like domain-containing protein | - |