T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 53352..94327
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTE28_RS00320 (D616_p112062) | 51068..53359 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| HTE28_RS00325 (D616_p112061) | 53352..54422 | - | 1071 | WP_000151582 | IncI1-type conjugal transfer protein TrbB | trbB |
| HTE28_RS00330 (D616_p112060) | 54441..55649 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| HTE28_RS00335 (D616_p112058) | 55941..56093 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| HTE28_RS00340 (D616_p112057) | 56165..56416 | - | 252 | WP_001291964 | hypothetical protein | - |
| HTE28_RS00620 | 56914..57009 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| HTE28_RS00345 (D616_p112055) | 57074..57250 | - | 177 | WP_001054904 | hypothetical protein | - |
| HTE28_RS00350 (D616_p112053) | 57641..57850 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| HTE28_RS00355 (D616_p112052) | 57922..58404 | - | 483 | WP_001672078 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HTE28_RS00360 (D616_p112051) | 58645..60813 | - | 2169 | WP_021265679 | DotA/TraY family protein | traY |
| HTE28_RS00365 (D616_p112050) | 60910..61494 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| HTE28_RS00370 (D616_p112049) | 61523..62725 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| HTE28_RS00375 (D616_p112048) | 62692..63306 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| HTE28_RS00380 (D616_p112047) | 63306..66350 | - | 3045 | WP_021265678 | IncI1-type conjugal transfer protein TraU | traU |
| HTE28_RS00385 (D616_p112046) | 66440..67240 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| HTE28_RS00390 (D616_p112045) | 67224..67412 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| HTE28_RS00395 (D616_p112044) | 67476..67880 | - | 405 | WP_000086958 | IncI1-type conjugal transfer protein TraR | traR |
| HTE28_RS00400 (D616_p112043) | 67931..68458 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| HTE28_RS00405 (D616_p112042) | 68458..69162 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| HTE28_RS00410 (D616_p112041) | 69162..70451 | - | 1290 | WP_001272003 | conjugal transfer protein TraO | traO |
| HTE28_RS00415 (D616_p112040) | 70454..71437 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| HTE28_RS00420 (D616_p112039) | 71448..72140 | - | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| HTE28_RS00425 (D616_p112038) | 72137..72484 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| HTE28_RS00430 (D616_p112037) | 72502..76269 | - | 3768 | WP_001141527 | LPD7 domain-containing protein | - |
| HTE28_RS00435 (D616_p112036) | 76358..76909 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| HTE28_RS00440 (D616_p112035) | 76924..77214 | - | 291 | WP_001299214 | hypothetical protein | traK |
| HTE28_RS00445 (D616_p112034) | 77211..78359 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| HTE28_RS00450 (D616_p112033) | 78356..79174 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| HTE28_RS00455 (D616_p112032) | 79171..79629 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HTE28_RS00460 (D616_p112030) | 80024..80608 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| HTE28_RS00465 (D616_p112029) | 80668..81870 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| HTE28_RS00470 (D616_p112028) | 81955..82779 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| HTE28_RS00475 (D616_p112027) | 82930..84084 | - | 1155 | WP_001139957 | site-specific integrase | - |
| HTE28_RS00610 | 84068..84367 | + | 300 | WP_223873359 | pilus assembly protein PilV | - |
| HTE28_RS00485 (D616_p112023) | 84878..86140 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HTE28_RS00490 (D616_p112021) | 86428..87303 | + | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| HTE28_RS00495 | 87350..87694 | - | 345 | Protein_97 | WbuC family cupin fold metalloprotein | - |
| HTE28_RS00615 | 87694..87903 | + | 210 | Protein_98 | hypothetical protein | - |
| HTE28_RS00505 (D616_p112017) | 88397..89821 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HTE28_RS00510 | 89821..90477 | - | 657 | WP_001193553 | prepilin peptidase | - |
| HTE28_RS00515 | 90462..91022 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| HTE28_RS00520 (D616_p112016) | 91032..91646 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| HTE28_RS00525 (D616_p112015) | 91664..92761 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| HTE28_RS00530 (D616_p112014) | 92774..94327 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HTE28_RS00535 (D616_p112013) | 94338..94790 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| HTE28_RS00540 (D616_p112012) | 94777..96072 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| HTE28_RS00545 (D616_p112011) | 96065..97747 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| HTE28_RS00550 (D616_p112010) | 97761..98198 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| HTE28_RS00555 (D616_p112009) | 98198..99265 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |