T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 164956..194970
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPH93_RS27130 (NPH93_27120) | 164956..167268 | - | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NPH93_RS27135 (NPH93_27125) | 167397..168086 | - | 690 | Protein_179 | hypothetical protein | - |
| NPH93_RS27140 (NPH93_27130) | 168278..169009 | - | 732 | WP_032329926 | conjugal transfer complement resistance protein TraT | - |
| NPH93_RS27145 (NPH93_27135) | 169318..169842 | - | 525 | WP_015065538 | hypothetical protein | - |
| NPH93_RS27150 (NPH93_27140) | 169853..172696 | - | 2844 | WP_023157999 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NPH93_RS27155 (NPH93_27145) | 172696..174075 | - | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| NPH93_RS27160 (NPH93_27150) | 174053..174496 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| NPH93_RS27165 (NPH93_27155) | 174542..175099 | - | 558 | WP_023158002 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NPH93_RS27170 (NPH93_27160) | 175071..175310 | - | 240 | WP_023158003 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NPH93_RS27175 (NPH93_27165) | 175321..176073 | - | 753 | WP_015065535 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NPH93_RS27180 (NPH93_27170) | 176094..176420 | - | 327 | WP_015065534 | hypothetical protein | - |
| NPH93_RS27185 (NPH93_27175) | 176433..176681 | - | 249 | WP_004152675 | hypothetical protein | - |
| NPH93_RS27190 (NPH93_27180) | 176659..176913 | - | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| NPH93_RS27195 (NPH93_27185) | 176945..178900 | - | 1956 | WP_015065533 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NPH93_RS27200 (NPH93_27190) | 178959..179606 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NPH93_RS27205 (NPH93_27195) | 179685..179861 | - | 177 | WP_162866177 | hypothetical protein | - |
| NPH93_RS27210 (NPH93_27200) | 179882..180871 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| NPH93_RS27215 (NPH93_27205) | 180868..181269 | - | 402 | WP_023158005 | hypothetical protein | - |
| NPH93_RS27220 (NPH93_27210) | 181304..181939 | - | 636 | WP_023158006 | type-F conjugative transfer system protein TraW | traW |
| NPH93_RS27225 (NPH93_27215) | 181939..182328 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| NPH93_RS27230 (NPH93_27220) | 182328..184967 | - | 2640 | WP_023158007 | type IV secretion system protein TraC | virb4 |
| NPH93_RS27235 (NPH93_27225) | 185039..185437 | - | 399 | WP_023158008 | hypothetical protein | - |
| NPH93_RS27240 (NPH93_27230) | 185445..185834 | - | 390 | WP_023158009 | hypothetical protein | - |
| NPH93_RS27245 (NPH93_27235) | 185877..186281 | - | 405 | WP_016831042 | hypothetical protein | - |
| NPH93_RS27250 (NPH93_27240) | 186348..186659 | - | 312 | WP_014386200 | hypothetical protein | - |
| NPH93_RS27255 (NPH93_27245) | 186660..186878 | - | 219 | WP_014386199 | hypothetical protein | - |
| NPH93_RS27260 (NPH93_27250) | 186902..187191 | - | 290 | Protein_204 | hypothetical protein | - |
| NPH93_RS27265 (NPH93_27255) | 187196..187606 | - | 411 | WP_016831039 | hypothetical protein | - |
| NPH93_RS27270 (NPH93_27260) | 187738..188322 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| NPH93_RS27275 (NPH93_27265) | 188345..188941 | - | 597 | Protein_207 | conjugal transfer pilus-stabilizing protein TraP | - |
| NPH93_RS27280 (NPH93_27270) | 188934..190358 | - | 1425 | WP_023158013 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NPH93_RS27285 (NPH93_27275) | 190358..191098 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| NPH93_RS27290 (NPH93_27280) | 191085..191651 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| NPH93_RS27295 (NPH93_27285) | 191671..191976 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NPH93_RS27300 (NPH93_27290) | 191990..192358 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| NPH93_RS27305 (NPH93_27295) | 192420..192626 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| NPH93_RS27310 (NPH93_27300) | 192759..193478 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| NPH93_RS27315 (NPH93_27305) | 193678..194094 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NPH93_RS27320 (NPH93_27310) | 194485..194970 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| NPH93_RS27325 (NPH93_27315) | 195003..195332 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| NPH93_RS27330 (NPH93_27320) | 195365..196186 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| NPH93_RS27335 (NPH93_27325) | 197014..197577 | - | 564 | WP_004182054 | methyltransferase | - |
| NPH93_RS27340 (NPH93_27330) | 197625..198980 | - | 1356 | WP_004182052 | DUF3560 domain-containing protein | - |
| NPH93_RS27345 (NPH93_27335) | 199032..199262 | - | 231 | WP_001568051 | hypothetical protein | - |
| NPH93_RS27350 (NPH93_27340) | 199354..199581 | - | 228 | WP_004182050 | hypothetical protein | - |