T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 201643..217562
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2W42_RS21960 (L2W42_21960) | 197759..198744 | + | 986 | Protein_201 | plasmid partitioning protein RepB | - |
| L2W42_RS21965 (L2W42_21965) | 200091..200531 | + | 441 | WP_239600196 | hypothetical protein | - |
| L2W42_RS21970 (L2W42_21970) | 200605..201306 | + | 702 | WP_239600198 | IS6 family transposase | - |
| L2W42_RS21975 (L2W42_21975) | 201375..201629 | + | 255 | Protein_204 | nitrilase-related carbon-nitrogen hydrolase | - |
| L2W42_RS21980 (L2W42_21980) | 201643..202290 | + | 648 | WP_239600200 | TraH family protein | virB1 |
| L2W42_RS21985 (L2W42_21985) | 203330..204544 | - | 1215 | WP_239600202 | plasmid replication protein RepC | - |
| L2W42_RS21990 (L2W42_21990) | 204746..205771 | - | 1026 | WP_239600204 | plasmid partitioning protein RepB | - |
| L2W42_RS21995 (L2W42_21995) | 205768..207030 | - | 1263 | WP_239600278 | plasmid partitioning protein RepA | - |
| L2W42_RS22000 (L2W42_22000) | 207373..207996 | + | 624 | WP_239600206 | acyl-homoserine-lactone synthase TraI | - |
| L2W42_RS22005 (L2W42_22005) | 208007..208984 | + | 978 | WP_239600208 | P-type conjugative transfer ATPase TrbB | virB11 |
| L2W42_RS22010 (L2W42_22010) | 208974..209357 | + | 384 | WP_239600211 | TrbC/VirB2 family protein | virB2 |
| L2W42_RS22015 (L2W42_22015) | 209350..209649 | + | 300 | WP_239600213 | conjugal transfer protein TrbD | virB3 |
| L2W42_RS22020 (L2W42_22020) | 209660..212116 | + | 2457 | WP_239600215 | conjugal transfer protein TrbE | virb4 |
| L2W42_RS22025 (L2W42_22025) | 212088..212891 | + | 804 | WP_239600217 | P-type conjugative transfer protein TrbJ | virB5 |
| L2W42_RS22030 (L2W42_22030) | 212888..213088 | + | 201 | WP_239600219 | entry exclusion protein TrbK | - |
| L2W42_RS22035 (L2W42_22035) | 213082..214263 | + | 1182 | WP_239600220 | P-type conjugative transfer protein TrbL | virB6 |
| L2W42_RS22040 (L2W42_22040) | 214284..214946 | + | 663 | WP_239600221 | conjugal transfer protein TrbF | virB8 |
| L2W42_RS22045 (L2W42_22045) | 214963..215772 | + | 810 | WP_239600222 | P-type conjugative transfer protein TrbG | virB9 |
| L2W42_RS22050 (L2W42_22050) | 215776..216213 | + | 438 | WP_239600224 | conjugal transfer protein TrbH | - |
| L2W42_RS22055 (L2W42_22055) | 216225..217562 | + | 1338 | WP_239600226 | IncP-type conjugal transfer protein TrbI | virB10 |
| L2W42_RS22060 (L2W42_22060) | 217859..218563 | + | 705 | WP_239600280 | autoinducer binding domain-containing protein | - |
| L2W42_RS22065 (L2W42_22065) | 218567..218890 | - | 324 | WP_239600227 | transcriptional repressor TraM | - |
| L2W42_RS22070 (L2W42_22070) | 219107..219319 | + | 213 | WP_239600229 | helix-turn-helix transcriptional regulator | - |
| L2W42_RS22075 (L2W42_22075) | 219444..220072 | + | 629 | Protein_224 | DUF433 domain-containing protein | - |
| L2W42_RS36075 | 220069..220356 | + | 288 | Protein_225 | DUF5615 family PIN-like protein | - |
| L2W42_RS22085 (L2W42_22085) | 220368..220520 | - | 153 | Protein_226 | conjugal transfer protein TraH | - |
| L2W42_RS22090 (L2W42_22090) | 220537..221700 | - | 1164 | WP_239600230 | conjugal transfer protein TraB | - |
| L2W42_RS22095 (L2W42_22095) | 221690..222193 | - | 504 | WP_239600231 | conjugative transfer signal peptidase TraF | - |