T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42778..66822
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS987_RS00210 (D670_p1061) | 42778..45012 | - | 2235 | WP_088546709 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HS987_RS00215 (D670_p1062) | 45163..45900 | - | 738 | WP_088546708 | conjugal transfer complement resistance protein TraT | - |
| HS987_RS00220 | 46078..46638 | - | 561 | WP_088546707 | protein traS | - |
| HS987_RS00225 (D670_p1063) | 46650..49547 | - | 2898 | WP_015062635 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HS987_RS00230 (D670_p1064) | 49549..50910 | - | 1362 | WP_015062636 | conjugal transfer pilus assembly protein TraH | traH |
| HS987_RS00235 (D670_p1065) | 50910..51521 | - | 612 | WP_015062637 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HS987_RS00240 (D670_p1066) | 51543..52322 | - | 780 | WP_015062638 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HS987_RS00245 (D670_p1067) | 52319..54148 | - | 1830 | WP_015062639 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HS987_RS00250 (D670_p1068) | 54145..54747 | - | 603 | WP_309301465 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HS987_RS00255 (D670_p1069) | 54756..55124 | - | 369 | WP_015062641 | hypothetical protein | - |
| HS987_RS00260 (D670_p1070) | 55135..56130 | - | 996 | WP_015062642 | conjugal transfer pilus assembly protein TraU | traU |
| HS987_RS00265 (D670_p1071) | 56127..56762 | - | 636 | WP_015062643 | type-F conjugative transfer system protein TraW | traW |
| HS987_RS00270 (D670_p1072) | 56762..57226 | - | 465 | WP_015062644 | type-F conjugative transfer system protein TrbI | - |
| HS987_RS00275 (D670_p1073) | 57223..59814 | - | 2592 | WP_015062645 | type IV secretion system protein TraC | virb4 |
| HS987_RS00280 (D670_p1074) | 59825..60439 | - | 615 | WP_015062646 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS987_RS00285 (D670_p1075) | 60550..60774 | - | 225 | WP_008455352 | TraR/DksA C4-type zinc finger protein | - |
| HS987_RS00290 (D670_p1076) | 60886..62247 | - | 1362 | WP_000024509 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HS987_RS00295 (D670_p1077) | 62234..62974 | - | 741 | WP_015062647 | type-F conjugative transfer system secretin TraK | traK |
| HS987_RS00300 (D670_p1078) | 62964..63527 | - | 564 | WP_015062648 | type IV conjugative transfer system protein TraE | traE |
| HS987_RS00305 (D670_p1079) | 63547..63852 | - | 306 | WP_000398849 | type IV conjugative transfer system protein TraL | traL |
| HS987_RS00310 (D670_p1080) | 63854..64213 | - | 360 | WP_001054221 | type IV conjugative transfer system pilin TraA | - |
| HS987_RS00315 (D670_p1081) | 64330..64563 | - | 234 | WP_000662610 | TraY domain-containing protein | - |
| HS987_RS00320 (D670_p1082) | 64769..65218 | - | 450 | WP_015062649 | helix-turn-helix domain-containing protein | - |
| HS987_RS00325 (D670_p1083) | 65515..65898 | - | 384 | WP_015062650 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HS987_RS00330 (D670_p1085) | 66367..66822 | + | 456 | WP_015062652 | transglycosylase SLT domain-containing protein | virB1 |
| HS987_RS00335 (D670_p1086) | 66833..67419 | - | 587 | Protein_66 | antirestriction protein | - |
| HS987_RS00340 (D670_p1088) | 68010..68843 | - | 834 | WP_015062654 | N-6 DNA methylase | - |
| HS987_RS00345 (D670_p1089) | 68890..69036 | - | 147 | WP_001159046 | hypothetical protein | - |
| HS987_RS00350 (D670_p1090) | 69131..69478 | - | 348 | WP_000550116 | hypothetical protein | - |
| HS987_RS00355 (D670_p1091) | 69535..69939 | - | 405 | WP_015062655 | hypothetical protein | - |
| HS987_RS00720 | 70591..70741 | - | 151 | Protein_71 | hypothetical protein | - |