T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 33781..41721
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS937_RS00210 (D708_p3045) | 29529..29741 | - | 213 | WP_015062556 | hypothetical protein | - |
| HS937_RS00215 | 29771..30034 | - | 264 | WP_103750672 | hypothetical protein | - |
| HS937_RS00220 | 30031..30345 | - | 315 | WP_172684892 | hypothetical protein | - |
| HS937_RS00225 (D708_p3047) | 30391..30744 | - | 354 | WP_015062558 | hypothetical protein | - |
| HS937_RS00230 (D708_p3048) | 30785..31012 | - | 228 | WP_015062559 | hypothetical protein | - |
| HS937_RS00235 (D708_p3049) | 31114..31659 | - | 546 | WP_015062560 | restriction endonuclease | - |
| HS937_RS00240 (D708_p3050) | 31707..32168 | - | 462 | WP_172684893 | hypothetical protein | - |
| HS937_RS00245 (D708_p3052) | 32670..32987 | - | 318 | WP_015062563 | hypothetical protein | - |
| HS937_RS00250 (D708_p3053) | 33080..33508 | - | 429 | WP_015062564 | hypothetical protein | - |
| HS937_RS00255 (D708_p3054) | 33512..33757 | - | 246 | WP_015062565 | H-NS histone family protein | - |
| HS937_RS00260 (D708_p3055) | 33781..34599 | + | 819 | WP_172684894 | lytic transglycosylase domain-containing protein | virB1 |
| HS937_RS00265 (D708_p3056) | 34596..34928 | + | 333 | WP_015062567 | hypothetical protein | - |
| HS937_RS00270 (D708_p3057) | 34912..35208 | + | 297 | WP_015062568 | TrbC/VirB2 family protein | virB2 |
| HS937_RS00275 (D708_p3058) | 35254..35565 | + | 312 | WP_015062569 | VirB3 family type IV secretion system protein | virB3 |
| HS937_RS00280 (D708_p3059) | 35565..36977 | + | 1413 | WP_015062570 | VirB4 family type IV secretion system protein | virb4 |
| HS937_RS00285 (D708_p3060) | 37090..38319 | - | 1230 | WP_015062536 | IS91 family transposase | - |
| HS937_RS00290 (D708_p3061) | 38300..38581 | - | 282 | WP_015062535 | hypothetical protein | - |
| HS937_RS00295 (D708_p3062) | 38651..39280 | + | 630 | WP_015062571 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HS937_RS00300 (D708_p3063) | 39454..40683 | - | 1230 | WP_015062536 | IS91 family transposase | - |
| HS937_RS00305 (D708_p3064) | 40664..40945 | - | 282 | WP_015062535 | hypothetical protein | - |
| HS937_RS00310 (D708_p3065) | 40987..41721 | + | 735 | WP_015062572 | ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) | virb4 |