T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 4377..32263
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW43_RS28855 (HW43_23490) | 1..572 | + | 572 | Protein_0 | type 4b pilus protein PilO2 | - |
| HW43_RS24145 (HW43_23495) | 624..1019 | + | 396 | WP_048264131 | type IV pilus biogenesis protein PilP | - |
| HW43_RS24150 (HW43_23500) | 1104..2611 | + | 1508 | Protein_2 | ATPase, T2SS/T4P/T4SS family | - |
| HW43_RS24155 (HW43_23505) | 2613..3713 | + | 1101 | WP_021292782 | type II secretion system F family protein | - |
| HW43_RS24160 (HW43_23510) | 3787..4323 | + | 537 | WP_040118365 | type 4 pilus major pilin | - |
| HW43_RS24165 (HW43_23515) | 4377..4850 | + | 474 | WP_000870986 | lytic transglycosylase domain-containing protein | virB1 |
| HW43_RS24170 (HW43_23520) | 4869..5501 | + | 633 | WP_021292783 | prepilin peptidase | - |
| HW43_RS24175 (HW43_23525) | 5506..6870 | + | 1365 | WP_021292784 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HW43_RS28620 | 7128..7286 | + | 159 | Protein_8 | integrase | - |
| HW43_RS24180 (HW43_23540) | 7328..7618 | + | 291 | WP_021292787 | hypothetical protein | - |
| HW43_RS24185 (HW43_23545) | 7710..8030 | - | 321 | WP_021292788 | hypothetical protein | - |
| HW43_RS24190 (HW43_23550) | 8290..9111 | + | 822 | WP_021292789 | hypothetical protein | traE |
| HW43_RS24195 (HW43_23555) | 9201..10403 | + | 1203 | WP_021292790 | conjugal transfer protein TraF | - |
| HW43_RS28135 | 10543..10713 | + | 171 | WP_021292791 | hypothetical protein | - |
| HW43_RS24200 (HW43_23565) | 10762..11214 | + | 453 | WP_001081199 | DotD/TraH family lipoprotein | - |
| HW43_RS24205 (HW43_23570) | 11211..12047 | + | 837 | WP_000848138 | type IV secretory system conjugative DNA transfer family protein | traI |
| HW43_RS24210 (HW43_23575) | 12031..13179 | + | 1149 | WP_021292792 | plasmid transfer ATPase TraJ | virB11 |
| HW43_RS24215 (HW43_23580) | 13176..13466 | + | 291 | WP_000817799 | hypothetical protein | traK |
| HW43_RS24220 (HW43_23585) | 13530..17552 | + | 4023 | WP_021292793 | LPD7 domain-containing protein | - |
| HW43_RS24225 (HW43_23590) | 17569..17919 | + | 351 | WP_001056369 | hypothetical protein | traL |
| HW43_RS24230 (HW43_23595) | 17931..18626 | + | 696 | WP_001287263 | DotI/IcmL family type IV secretion protein | traM |
| HW43_RS24235 (HW43_23600) | 18637..19611 | + | 975 | WP_001165564 | DotH/IcmK family type IV secretion protein | traN |
| HW43_RS24240 (HW43_23605) | 19615..20946 | + | 1332 | WP_021292795 | conjugal transfer protein TraO | traO |
| HW43_RS24245 (HW43_23610) | 20943..21656 | + | 714 | WP_021292796 | conjugal transfer protein TraP | traP |
| HW43_RS24250 (HW43_23615) | 21653..22183 | + | 531 | WP_000987022 | conjugal transfer protein TraQ | traQ |
| HW43_RS24255 (HW43_23620) | 22230..22628 | + | 399 | WP_021293311 | DUF6750 family protein | traR |
| HW43_RS28770 (HW43_23625) | 22685..22936 | + | 252 | WP_021292797 | hypothetical protein | - |
| HW43_RS24265 (HW43_23630) | 22851..23669 | + | 819 | WP_148935988 | conjugal transfer protein TraT | traT |
| HW43_RS24270 (HW43_23635) | 23724..24083 | + | 360 | WP_000380400 | hypothetical protein | - |
| HW43_RS24275 (HW43_23640) | 24083..24463 | + | 381 | WP_021292799 | hypothetical protein | - |
| HW43_RS24280 (HW43_23645) | 24639..27683 | + | 3045 | WP_001024758 | conjugal transfer protein | traU |
| HW43_RS24285 (HW43_23650) | 27683..28300 | + | 618 | WP_000286857 | hypothetical protein | traV |
| HW43_RS24290 (HW43_23655) | 28261..29466 | + | 1206 | WP_021293310 | conjugal transfer protein TraW | traW |
| HW43_RS24295 (HW43_23660) | 29567..30031 | + | 465 | WP_000946266 | conjugal transfer protein TraX | - |
| HW43_RS24300 (HW43_23665) | 30104..32263 | + | 2160 | WP_040118366 | DotA/TraY family protein | traY |
| HW43_RS24305 (HW43_23670) | 32345..32992 | + | 648 | WP_001563237 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HW43_RS24315 | 33306..33458 | - | 153 | WP_001367784 | Hok/Gef family protein | - |
| HW43_RS24320 (HW43_23680) | 33792..34034 | + | 243 | WP_000064387 | hypothetical protein | - |
| HW43_RS24325 (HW43_23685) | 34127..35662 | - | 1536 | WP_001367813 | phosphoethanolamine transferase | - |
| HW43_RS24330 (HW43_23690) | 35862..36317 | - | 456 | WP_021292801 | DUF2569 family protein | - |
| HW43_RS24335 (HW43_23695) | 36405..37028 | - | 624 | WP_001158019 | hypothetical protein | - |