T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 18248..44184
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UMNK88_RS28125 (UMNK88_pHly16) | 15512..16012 | - | 501 | WP_015675113 | phospholipase D family protein | - |
| UMNK88_RS28130 (UMNK88_pHly17) | 16042..18258 | - | 2217 | WP_000963393 | F-type conjugative transfer protein TrbC | - |
| UMNK88_RS29410 (UMNK88_pHly18) | 18248..19168 | - | 921 | WP_001099721 | hypothetical protein | trbB |
| UMNK88_RS28140 (UMNK88_pHly19) | 19178..20551 | - | 1374 | WP_000020269 | hypothetical protein | trbA |
| UMNK88_RS28145 | 20839..20976 | - | 138 | WP_000078925 | Hok/Gef family protein | - |
| UMNK88_RS28150 (UMNK88_pHly20) | 21335..21988 | - | 654 | WP_000090954 | DUF5710 domain-containing protein | - |
| UMNK88_RS28155 (UMNK88_pHly21) | 22027..22383 | - | 357 | WP_000839608 | hypothetical protein | - |
| UMNK88_RS28160 | 22643..22867 | - | 225 | WP_024250740 | hemolysin expression modulator Hha | - |
| UMNK88_RS28165 (UMNK88_pHly22) | 23001..23420 | - | 420 | WP_000221970 | hypothetical protein | - |
| UMNK88_RS28170 (UMNK88_pHly23) | 23581..25731 | - | 2151 | WP_000221823 | DotA/TraY family protein | traY |
| UMNK88_RS28175 (UMNK88_pHly24) | 25813..26157 | - | 345 | WP_000061675 | hypothetical protein | - |
| UMNK88_RS28180 (UMNK88_pHly25) | 26159..26659 | - | 501 | WP_148277502 | hypothetical protein | - |
| UMNK88_RS28185 (UMNK88_pHly26) | 26724..27254 | - | 531 | WP_000678126 | conjugal transfer protein TraX | - |
| UMNK88_RS28190 (UMNK88_pHly27) | 27251..28471 | - | 1221 | WP_001039317 | conjugal transfer protein TraW | traW |
| UMNK88_RS28195 (UMNK88_pHly28) | 28495..31551 | - | 3057 | WP_000906733 | hypothetical protein | traU |
| UMNK88_RS29415 (UMNK88_pHly29) | 31555..32166 | - | 612 | WP_000955158 | hypothetical protein | traT |
| UMNK88_RS28205 | 32160..32429 | - | 270 | WP_001024052 | hypothetical protein | - |
| UMNK88_RS29420 (UMNK88_pHly30) | 32485..32892 | - | 408 | WP_001059622 | DUF6750 family protein | traR |
| UMNK88_RS28215 (UMNK88_pHly31) | 32924..33454 | - | 531 | WP_024250743 | conjugal transfer protein TraQ | traQ |
| UMNK88_RS29425 (UMNK88_pHly32) | 33459..34169 | - | 711 | WP_000842735 | conjugal transfer protein TraP | traP |
| UMNK88_RS28225 (UMNK88_pHly33) | 34170..35363 | - | 1194 | WP_000963756 | conjugal transfer protein TraO | traO |
| UMNK88_RS28230 (UMNK88_pHly34) | 35366..36409 | - | 1044 | WP_000199394 | DotH/IcmK family type IV secretion protein | traN |
| UMNK88_RS28235 (UMNK88_pHly35) | 36406..37077 | - | 672 | WP_000753819 | DotI/IcmL/TraM family protein | traM |
| UMNK88_RS28240 (UMNK88_pHly36) | 37097..37576 | - | 480 | WP_000853820 | hypothetical protein | traL |
| UMNK88_RS35370 (UMNK88_pHly37) | 37591..41034 | - | 3444 | WP_000189054 | DUF5710 domain-containing protein | - |
| UMNK88_RS33610 | 41052..41312 | - | 261 | WP_000796496 | IcmT/TraK family protein | traK |
| UMNK88_RS28255 (UMNK88_pHly39) | 41305..42477 | - | 1173 | WP_000380306 | plasmid transfer ATPase TraJ | virB11 |
| UMNK88_RS28260 (UMNK88_pHly40) | 42483..43265 | - | 783 | WP_000872512 | type IV secretory system conjugative DNA transfer family protein | traI |
| UMNK88_RS28265 (UMNK88_pHly41) | 43262..43687 | - | 426 | WP_000776569 | DotD/TraH family lipoprotein | - |
| UMNK88_RS28270 | 43714..44184 | - | 471 | WP_000269367 | lytic transglycosylase domain-containing protein | virB1 |
| UMNK88_RS28275 (UMNK88_pHly43) | 44184..44681 | - | 498 | WP_000559317 | hypothetical protein | - |
| UMNK88_RS28280 (UMNK88_pHly44) | 44691..44933 | - | 243 | WP_001245734 | hypothetical protein | - |
| UMNK88_RS28285 (UMNK88_pHly45) | 45227..45913 | - | 687 | WP_000206190 | DUF2913 family protein | - |
| UMNK88_RS28290 (UMNK88_pHly46) | 46010..46513 | - | 504 | WP_000206175 | transcription termination/antitermination NusG family protein | - |
| UMNK88_RS28295 | 47272..48303 | + | 1032 | WP_000907883 | plasmid replication initiator RepA | - |