T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49378..60698
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SNSL254_RS00345 | 45409..45642 | - | 234 | WP_001191890 | hypothetical protein | - |
| SNSL254_RS00350 (SNSL254_pSN254_0064) | 45624..46241 | - | 618 | WP_001249395 | hypothetical protein | - |
| SNSL254_RS00355 (SNSL254_pSN254_0065) | 46409..49381 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| SNSL254_RS00360 (SNSL254_pSN254_0066) | 49378..51243 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| SNSL254_RS00365 (SNSL254_pSN254_0067) | 51293..51838 | + | 546 | WP_000228720 | hypothetical protein | - |
| SNSL254_RS00370 (SNSL254_pSN254_0068) | 51795..52424 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| SNSL254_RS00375 (SNSL254_pSN254_0069) | 52434..52880 | + | 447 | WP_000122507 | hypothetical protein | - |
| SNSL254_RS00380 (SNSL254_pSN254_0070) | 52890..53267 | + | 378 | WP_000869297 | hypothetical protein | - |
| SNSL254_RS00385 (SNSL254_pSN254_0071) | 53267..53929 | + | 663 | WP_001231464 | hypothetical protein | - |
| SNSL254_RS00390 (SNSL254_pSN254_0072) | 54265..54630 | + | 366 | WP_001052530 | hypothetical protein | - |
| SNSL254_RS00395 (SNSL254_pSN254_0073) | 54775..55056 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| SNSL254_RS00400 (SNSL254_pSN254_0074) | 55053..55679 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| SNSL254_RS00405 (SNSL254_pSN254_0075) | 55663..56580 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| SNSL254_RS00410 (SNSL254_pSN254_0076) | 56580..57893 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| SNSL254_RS00415 (SNSL254_pSN254_0077) | 57890..58468 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| SNSL254_RS00420 (SNSL254_pSN254_0078) | 58472..58864 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| SNSL254_RS00425 (SNSL254_pSN254_0080) | 59149..60108 | + | 960 | Protein_83 | IS1380-like element ISEcp1 family transposase | - |
| SNSL254_RS00430 (SNSL254_pSN254_0079) | 60102..60809 | - | 708 | WP_000637385 | conjugal transfer protein TraC | - |
| SNSL254_RS00435 (SNSL254_pSN254_0081) | 60806..61513 | - | 708 | WP_001259346 | DsbC family protein | - |