T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 153214..162304
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLH65_RS19995 (CLH65_19180) | 148239..148604 | - | 366 | Protein_172 | LuxR family transcriptional regulator | - |
| CLH65_RS19260 (CLH65_19185) | 148861..149178 | + | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| CLH65_RS19265 (CLH65_19190) | 149175..149708 | - | 534 | WP_001221666 | lipocalin family protein | - |
| CLH65_RS19270 (CLH65_19195) | 149802..150947 | - | 1146 | WP_014386387 | class C beta-lactamase CMY-16 | - |
| CLH65_RS19275 (CLH65_19200) | 151271..152533 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| CLH65_RS19280 (CLH65_19205) | 152818..153210 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| CLH65_RS19285 (CLH65_19210) | 153214..153792 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| CLH65_RS19290 (CLH65_19215) | 153789..155102 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| CLH65_RS19295 (CLH65_19220) | 155102..156019 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| CLH65_RS19300 (CLH65_19225) | 156003..156629 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| CLH65_RS19305 (CLH65_19230) | 156626..156907 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| CLH65_RS19310 (CLH65_19235) | 157052..157417 | - | 366 | WP_001052530 | hypothetical protein | - |
| CLH65_RS19775 | 157429..157572 | - | 144 | WP_001275801 | hypothetical protein | - |
| CLH65_RS19315 (CLH65_19240) | 157753..158415 | - | 663 | WP_001231464 | hypothetical protein | - |
| CLH65_RS19320 (CLH65_19245) | 158415..158792 | - | 378 | WP_000869297 | hypothetical protein | - |
| CLH65_RS19780 | 159034..159210 | - | 177 | WP_169342285 | hypothetical protein | - |
| CLH65_RS19330 (CLH65_19255) | 159258..159887 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| CLH65_RS19335 (CLH65_19260) | 159844..160389 | - | 546 | WP_000228720 | hypothetical protein | - |
| CLH65_RS19340 (CLH65_19265) | 160439..162304 | - | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| CLH65_RS19345 (CLH65_19270) | 162301..165273 | - | 2973 | WP_001326173 | MobH family relaxase | - |
| CLH65_RS19350 (CLH65_19275) | 165441..166058 | + | 618 | WP_001249395 | hypothetical protein | - |
| CLH65_RS19355 (CLH65_19280) | 166040..166273 | + | 234 | WP_001191890 | hypothetical protein | - |