T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 59004..77898
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYZ88_RS23925 (PYZ88_23900) | 54303..55580 | - | 1278 | WP_000170087 | DUF3150 domain-containing protein | - |
| PYZ88_RS23930 (PYZ88_23905) | 55780..56790 | - | 1011 | WP_000706865 | lambda-exonuclease family protein | - |
| PYZ88_RS23935 (PYZ88_23910) | 56853..57842 | - | 990 | WP_001282585 | phage recombination protein Bet | - |
| PYZ88_RS23940 (PYZ88_23915) | 57937..58467 | - | 531 | WP_000987165 | single-stranded DNA-binding protein | - |
| PYZ88_RS23945 (PYZ88_23920) | 58528..59061 | - | 534 | WP_227543304 | hypothetical protein | - |
| PYZ88_RS23950 (PYZ88_23925) | 59004..59561 | - | 558 | WP_275289564 | TraC family protein | virb4 |
| PYZ88_RS23955 (PYZ88_23930) | 59558..63727 | - | 4170 | WP_275289565 | Ig-like domain-containing protein | - |
| PYZ88_RS23960 | 63833..64198 | - | 366 | Protein_69 | LuxR family transcriptional regulator | - |
| PYZ88_RS23965 (PYZ88_23935) | 64455..64772 | + | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PYZ88_RS23970 (PYZ88_23940) | 64769..65302 | - | 534 | WP_001221666 | lipocalin family protein | - |
| PYZ88_RS23975 (PYZ88_23945) | 65396..66541 | - | 1146 | WP_015058212 | class C beta-lactamase CMY-6 | - |
| PYZ88_RS23980 (PYZ88_23950) | 66865..68127 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| PYZ88_RS23985 (PYZ88_23955) | 68412..68804 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PYZ88_RS23990 (PYZ88_23960) | 68808..69386 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PYZ88_RS23995 (PYZ88_23965) | 69383..70696 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| PYZ88_RS24000 (PYZ88_23970) | 70696..71613 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| PYZ88_RS24005 (PYZ88_23975) | 71597..72223 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PYZ88_RS24010 (PYZ88_23980) | 72220..72501 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PYZ88_RS24015 (PYZ88_23985) | 72646..73011 | - | 366 | WP_001052530 | hypothetical protein | - |
| PYZ88_RS24020 | 73023..73166 | - | 144 | WP_001275801 | hypothetical protein | - |
| PYZ88_RS24025 (PYZ88_23990) | 73347..74009 | - | 663 | WP_001231464 | hypothetical protein | - |
| PYZ88_RS24030 (PYZ88_23995) | 74009..74386 | - | 378 | WP_000869297 | hypothetical protein | - |
| PYZ88_RS24035 (PYZ88_24000) | 74396..74842 | - | 447 | WP_000122507 | hypothetical protein | - |
| PYZ88_RS24040 (PYZ88_24005) | 74852..75481 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| PYZ88_RS24045 (PYZ88_24010) | 75438..75983 | - | 546 | WP_000228720 | hypothetical protein | - |
| PYZ88_RS24050 (PYZ88_24015) | 76033..77898 | - | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| PYZ88_RS24055 (PYZ88_24020) | 77895..80867 | - | 2973 | WP_001326173 | MobH family relaxase | - |
| PYZ88_RS24060 (PYZ88_24025) | 81035..81652 | + | 618 | WP_001249395 | hypothetical protein | - |
| PYZ88_RS24065 (PYZ88_24030) | 81634..81867 | + | 234 | WP_001191890 | hypothetical protein | - |