T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 17139..42330
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LD277_RS29120 (LD277_29155) | 13164..13397 | - | 234 | WP_001191892 | hypothetical protein | - |
| LD277_RS29125 (LD277_29160) | 13379..13996 | - | 618 | WP_001249396 | hypothetical protein | - |
| LD277_RS29130 (LD277_29165) | 14164..17142 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| LD277_RS29135 (LD277_29170) | 17139..19004 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| LD277_RS29140 (LD277_29175) | 19054..19599 | + | 546 | WP_000228720 | hypothetical protein | - |
| LD277_RS29145 (LD277_29180) | 19556..20185 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| LD277_RS29150 (LD277_29185) | 20195..20641 | + | 447 | WP_000122506 | hypothetical protein | - |
| LD277_RS29155 (LD277_29190) | 20651..21028 | + | 378 | WP_000869261 | hypothetical protein | - |
| LD277_RS29160 (LD277_29195) | 21028..21690 | + | 663 | WP_001231463 | hypothetical protein | - |
| LD277_RS29165 (LD277_29200) | 21871..22014 | + | 144 | WP_001275801 | hypothetical protein | - |
| LD277_RS29170 (LD277_29205) | 22026..22391 | + | 366 | WP_001052531 | hypothetical protein | - |
| LD277_RS29175 (LD277_29210) | 22536..22817 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| LD277_RS29180 (LD277_29215) | 22814..23440 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| LD277_RS29185 (LD277_29220) | 23424..24341 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| LD277_RS29190 (LD277_29225) | 24341..25654 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| LD277_RS29195 (LD277_29230) | 25651..26229 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| LD277_RS29200 (LD277_29235) | 26233..26625 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| LD277_RS29205 (LD277_29240) | 26826..32357 | + | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| LD277_RS29210 (LD277_29245) | 32506..33213 | + | 708 | WP_001259347 | DsbC family protein | - |
| LD277_RS29215 (LD277_29250) | 33210..35657 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| LD277_RS29220 (LD277_29255) | 35672..35989 | + | 318 | WP_000351984 | hypothetical protein | - |
| LD277_RS29225 (LD277_29260) | 35986..36516 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| LD277_RS29230 (LD277_29265) | 36479..37744 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| LD277_RS29235 (LD277_29270) | 37741..38412 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| LD277_RS29240 (LD277_29275) | 38412..39416 | + | 1005 | WP_043940352 | TraU family protein | traU |
| LD277_RS29245 (LD277_29280) | 39532..42330 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| LD277_RS29250 (LD277_29285) | 42369..43229 | - | 861 | WP_000709517 | hypothetical protein | - |
| LD277_RS29255 (LD277_29290) | 43352..43993 | - | 642 | WP_000796664 | hypothetical protein | - |
| LD277_RS29260 (LD277_29295) | 44287..44607 | + | 321 | WP_000547566 | hypothetical protein | - |
| LD277_RS29265 (LD277_29300) | 44911..45096 | + | 186 | WP_001186917 | hypothetical protein | - |
| LD277_RS29270 (LD277_29305) | 45316..46284 | + | 969 | WP_000085162 | AAA family ATPase | - |
| LD277_RS29275 (LD277_29310) | 46295..47203 | + | 909 | WP_000739139 | hypothetical protein | - |