T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 114924..140115
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP80_RS30380 (LDP80_30420) | 110949..111182 | - | 234 | WP_001191892 | hypothetical protein | - |
| LDP80_RS30385 (LDP80_30425) | 111164..111781 | - | 618 | WP_001249396 | hypothetical protein | - |
| LDP80_RS30390 (LDP80_30430) | 111949..114927 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| LDP80_RS30395 (LDP80_30435) | 114924..116789 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| LDP80_RS30400 (LDP80_30440) | 116839..117384 | + | 546 | WP_000228720 | hypothetical protein | - |
| LDP80_RS30405 (LDP80_30445) | 117341..117970 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| LDP80_RS30410 (LDP80_30450) | 117980..118426 | + | 447 | WP_000122506 | hypothetical protein | - |
| LDP80_RS30415 (LDP80_30455) | 118436..118813 | + | 378 | WP_000869261 | hypothetical protein | - |
| LDP80_RS30420 (LDP80_30460) | 118813..119475 | + | 663 | WP_001231463 | hypothetical protein | - |
| LDP80_RS30425 (LDP80_30465) | 119811..120176 | + | 366 | WP_001052531 | hypothetical protein | - |
| LDP80_RS30430 (LDP80_30470) | 120321..120602 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| LDP80_RS30435 (LDP80_30475) | 120599..121225 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| LDP80_RS30440 (LDP80_30480) | 121209..122126 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| LDP80_RS30445 (LDP80_30485) | 122126..123439 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| LDP80_RS30450 (LDP80_30490) | 123436..124014 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| LDP80_RS30455 (LDP80_30495) | 124018..124410 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| LDP80_RS30460 (LDP80_30500) | 124611..130142 | + | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| LDP80_RS30465 (LDP80_30505) | 130291..130998 | + | 708 | WP_001259347 | DsbC family protein | - |
| LDP80_RS30470 (LDP80_30510) | 130995..133442 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| LDP80_RS30475 (LDP80_30515) | 133457..133774 | + | 318 | WP_000351984 | hypothetical protein | - |
| LDP80_RS30480 (LDP80_30520) | 133771..134301 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| LDP80_RS30485 (LDP80_30525) | 134264..135529 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| LDP80_RS30490 (LDP80_30530) | 135526..136197 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| LDP80_RS30495 (LDP80_30535) | 136197..137201 | + | 1005 | WP_043940352 | TraU family protein | traU |
| LDP80_RS30500 (LDP80_30540) | 137317..140115 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| LDP80_RS30505 (LDP80_30545) | 140154..141014 | - | 861 | WP_000709517 | hypothetical protein | - |
| LDP80_RS30510 (LDP80_30550) | 141137..141778 | - | 642 | WP_000796664 | hypothetical protein | - |
| LDP80_RS30515 (LDP80_30555) | 142072..142392 | + | 321 | WP_000547566 | hypothetical protein | - |
| LDP80_RS30520 (LDP80_30560) | 142696..142881 | + | 186 | WP_001186917 | hypothetical protein | - |
| LDP80_RS30525 (LDP80_30565) | 143101..144069 | + | 969 | WP_000085162 | AAA family ATPase | - |
| LDP80_RS30530 (LDP80_30570) | 144080..144988 | + | 909 | WP_000739139 | hypothetical protein | - |