T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 29366..55616
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP80_RS29290 (LDP80_29330) | 25807..26349 | + | 543 | WP_053390246 | antirestriction protein | - |
| LDP80_RS29295 (LDP80_29335) | 26372..26794 | - | 423 | WP_077268549 | transglycosylase SLT domain-containing protein | - |
| LDP80_RS29300 (LDP80_29340) | 27298..27690 | + | 393 | WP_020805752 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LDP80_RS29305 (LDP80_29345) | 27928..28629 | + | 702 | WP_223174962 | hypothetical protein | - |
| LDP80_RS29310 (LDP80_29350) | 28715..28915 | + | 201 | WP_048289787 | TraY domain-containing protein | - |
| LDP80_RS29315 (LDP80_29355) | 28984..29352 | + | 369 | WP_064343525 | type IV conjugative transfer system pilin TraA | - |
| LDP80_RS29320 (LDP80_29360) | 29366..29671 | + | 306 | WP_064343526 | type IV conjugative transfer system protein TraL | traL |
| LDP80_RS29325 (LDP80_29365) | 29687..30253 | + | 567 | WP_064359954 | type IV conjugative transfer system protein TraE | traE |
| LDP80_RS29330 (LDP80_29370) | 30240..30974 | + | 735 | WP_064343528 | type-F conjugative transfer system secretin TraK | traK |
| LDP80_RS29335 (LDP80_29375) | 30974..32395 | + | 1422 | WP_053390199 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LDP80_RS29340 (LDP80_29380) | 32388..32822 | + | 435 | WP_020322358 | conjugal transfer protein TraP | - |
| LDP80_RS29345 (LDP80_29385) | 32856..33440 | + | 585 | WP_064343530 | type IV conjugative transfer system lipoprotein TraV | traV |
| LDP80_RS29350 (LDP80_29390) | 34053..34241 | + | 189 | WP_053390286 | hypothetical protein | - |
| LDP80_RS29355 (LDP80_29395) | 34325..34726 | + | 402 | WP_064343532 | hypothetical protein | - |
| LDP80_RS29360 (LDP80_29400) | 34723..35022 | + | 300 | WP_053390308 | hypothetical protein | - |
| LDP80_RS29365 (LDP80_29405) | 35110..35493 | + | 384 | WP_042946290 | hypothetical protein | - |
| LDP80_RS29370 (LDP80_29410) | 35586..38225 | + | 2640 | WP_064343533 | type IV secretion system protein TraC | virb4 |
| LDP80_RS29375 (LDP80_29415) | 38225..38617 | + | 393 | WP_064343534 | type-F conjugative transfer system protein TrbI | - |
| LDP80_RS29380 (LDP80_29420) | 38614..39240 | + | 627 | WP_064343535 | type-F conjugative transfer system protein TraW | traW |
| LDP80_RS29385 (LDP80_29425) | 39284..40243 | + | 960 | WP_229295972 | conjugal transfer pilus assembly protein TraU | traU |
| LDP80_RS29390 (LDP80_29430) | 40256..40903 | + | 648 | WP_064343536 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LDP80_RS29395 (LDP80_29435) | 40900..41283 | + | 384 | WP_053390297 | hypothetical protein | - |
| LDP80_RS29400 (LDP80_29440) | 41280..43235 | + | 1956 | WP_064343537 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LDP80_RS29405 (LDP80_29445) | 43267..43527 | + | 261 | WP_225025344 | hypothetical protein | - |
| LDP80_RS29410 (LDP80_29450) | 43520..44131 | + | 612 | WP_053390217 | hypothetical protein | - |
| LDP80_RS29415 (LDP80_29455) | 44121..44363 | + | 243 | WP_053390218 | conjugal transfer protein TrbE | - |
| LDP80_RS29420 (LDP80_29460) | 44409..44735 | + | 327 | WP_053390219 | hypothetical protein | - |
| LDP80_RS29425 (LDP80_29465) | 44756..45508 | + | 753 | WP_053390220 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LDP80_RS29430 (LDP80_29470) | 45519..45755 | + | 237 | WP_053390221 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LDP80_RS29435 (LDP80_29475) | 45730..46290 | + | 561 | WP_039698500 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LDP80_RS29440 (LDP80_29480) | 46277..47647 | + | 1371 | WP_075606918 | conjugal transfer pilus assembly protein TraH | traH |
| LDP80_RS29445 (LDP80_29485) | 47647..50526 | + | 2880 | WP_064386194 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LDP80_RS29450 (LDP80_29490) | 50543..51211 | + | 669 | WP_128317877 | hypothetical protein | - |
| LDP80_RS29455 (LDP80_29495) | 51564..52295 | + | 732 | WP_064386198 | conjugal transfer complement resistance protein TraT | - |
| LDP80_RS29460 (LDP80_29500) | 52487..53179 | + | 693 | WP_202395549 | hypothetical protein | - |
| LDP80_RS29465 (LDP80_29505) | 53298..55616 | + | 2319 | WP_075606915 | type IV conjugative transfer system coupling protein TraD | virb4 |