T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 140576..150026
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXC48_RS00680 (pTi-SAKURA_p141) | 135962..136693 | - | 732 | WP_010891505 | (dimethylallyl)adenosine tRNA methylthiotransferase | - |
| HXC48_RS00685 (pTi-SAKURA_p142) | 137530..140031 | + | 2502 | WP_010891504 | two-component system sensor kinase VirA | - |
| HXC48_RS00690 (pTi-SAKURA_p143) | 140576..141313 | + | 738 | WP_010891503 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| HXC48_RS00695 (pTi-SAKURA_p144) | 141313..141678 | + | 366 | WP_010891502 | pilin major subunit VirB2 | virB2 |
| HXC48_RS00700 (pTi-SAKURA_p145) | 141678..142004 | + | 327 | WP_010891501 | type IV secretion system protein VirB3 | virB3 |
| HXC48_RS00705 (pTi-SAKURA_p146) | 142004..144373 | + | 2370 | WP_010891500 | type IV secretion/conjugal transfer ATPase VirB4 | virb4 |
| HXC48_RS00710 (pTi-SAKURA_p147) | 144390..145052 | + | 663 | WP_010891499 | pilin minor subunit VirB5 | - |
| HXC48_RS00715 (pTi-SAKURA_p148) | 145153..146040 | + | 888 | WP_010891498 | type IV secretion system protein | virB6 |
| HXC48_RS00720 (pTi-SAKURA_p149) | 146076..146243 | + | 168 | WP_010891497 | type IV secretion system lipoprotein VirB7 | - |
| HXC48_RS00725 (pTi-SAKURA_p150) | 146230..146943 | + | 714 | WP_010891496 | type IV secretion system protein VirB8 | virB8 |
| HXC48_RS00730 (pTi-SAKURA_p151) | 146940..147821 | + | 882 | WP_010891495 | P-type conjugative transfer protein VirB9 | virB9 |
| HXC48_RS00735 (pTi-SAKURA_p152) | 147818..148951 | + | 1134 | WP_010891494 | type IV secretion system protein VirB10 | virB10 |
| HXC48_RS00740 (pTi-SAKURA_p153) | 148992..150026 | + | 1035 | WP_010891493 | P-type DNA transfer ATPase VirB11 | virB11 |
| HXC48_RS00745 (pTi-SAKURA_p154) | 150245..151006 | + | 762 | WP_010891492 | two-component system response regulator VirG | - |
| HXC48_RS00750 (pTi-SAKURA_p155) | 151148..151756 | - | 609 | WP_010891491 | conjugal transfer protein VirC2 | - |
| HXC48_RS00755 (pTi-SAKURA_p156) | 151759..152454 | - | 696 | WP_010891490 | conjugal transfer ATPase VirC1 | - |
| HXC48_RS00760 (pTi-SAKURA_p157) | 152725..153168 | + | 444 | WP_010891489 | T-DNA border endonuclease subunit VirD1 | - |
| HXC48_RS00765 (pTi-SAKURA_p158) | 153202..154545 | + | 1344 | WP_010891488 | T-DNA border endonuclease VirD2 | - |