T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 41053..70289
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ43_RS25635 (LVJ43_25605) | 36256..36975 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| LVJ43_RS25640 (LVJ43_25610) | 37197..37346 | + | 150 | Protein_49 | plasmid maintenance protein Mok | - |
| LVJ43_RS25645 (LVJ43_25615) | 37288..37413 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| LVJ43_RS25650 (LVJ43_25620) | 37732..38028 | - | 297 | Protein_51 | hypothetical protein | - |
| LVJ43_RS25655 (LVJ43_25625) | 38328..38624 | + | 297 | WP_001272251 | hypothetical protein | - |
| LVJ43_RS25660 (LVJ43_25630) | 38805..39785 | + | 981 | WP_000019473 | IS5-like element ISKpn26 family transposase | - |
| LVJ43_RS25665 (LVJ43_25635) | 39935..40756 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| LVJ43_RS25670 (LVJ43_25640) | 41053..41700 | - | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| LVJ43_RS25675 (LVJ43_25645) | 41977..42360 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LVJ43_RS25680 (LVJ43_25650) | 42551..43237 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| LVJ43_RS25685 (LVJ43_25655) | 43331..43558 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| LVJ43_RS25690 (LVJ43_25660) | 43592..43957 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| LVJ43_RS25695 (LVJ43_25665) | 43972..44283 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| LVJ43_RS25700 (LVJ43_25670) | 44305..44871 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| LVJ43_RS25705 (LVJ43_25675) | 44858..45586 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| LVJ43_RS25710 (LVJ43_25680) | 45586..47013 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LVJ43_RS25715 (LVJ43_25685) | 47003..47593 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| LVJ43_RS25720 (LVJ43_25690) | 47580..47777 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| LVJ43_RS25725 (LVJ43_25695) | 47789..48040 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| LVJ43_RS25730 (LVJ43_25700) | 48037..48552 | + | 516 | WP_062955122 | type IV conjugative transfer system lipoprotein TraV | traV |
| LVJ43_RS25735 (LVJ43_25705) | 48687..48908 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| LVJ43_RS25740 (LVJ43_25710) | 49068..51695 | + | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| LVJ43_RS25745 (LVJ43_25715) | 51692..52078 | + | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| LVJ43_RS25750 (LVJ43_25720) | 52075..52707 | + | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| LVJ43_RS25755 (LVJ43_25725) | 52704..53696 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| LVJ43_RS25760 (LVJ43_25730) | 53723..54031 | + | 309 | WP_000412447 | hypothetical protein | - |
| LVJ43_RS25765 (LVJ43_25735) | 54094..54615 | + | 522 | WP_015059014 | hypothetical protein | - |
| LVJ43_RS25770 (LVJ43_25740) | 54642..55280 | + | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LVJ43_RS25775 (LVJ43_25745) | 55277..55648 | + | 372 | WP_000056336 | hypothetical protein | - |
| LVJ43_RS25780 (LVJ43_25750) | 55674..56096 | + | 423 | WP_001229309 | HNH endonuclease signature motif containing protein | - |
| LVJ43_RS25785 (LVJ43_25755) | 56093..57943 | + | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LVJ43_RS25790 (LVJ43_25760) | 57970..58227 | + | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| LVJ43_RS25795 (LVJ43_25765) | 58214..58963 | + | 750 | WP_072354014 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LVJ43_RS25800 (LVJ43_25770) | 59124..59360 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LVJ43_RS25805 (LVJ43_25775) | 59347..59892 | + | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LVJ43_RS25810 (LVJ43_25780) | 59882..60196 | + | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| LVJ43_RS25815 (LVJ43_25785) | 60150..60542 | + | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| LVJ43_RS25820 (LVJ43_25790) | 60529..61902 | + | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| LVJ43_RS25825 (LVJ43_25795) | 61899..64715 | + | 2817 | WP_015059018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LVJ43_RS25830 (LVJ43_25800) | 64748..65077 | + | 330 | WP_227650653 | hypothetical protein | - |
| LVJ43_RS25835 (LVJ43_25805) | 65095..66063 | + | 969 | WP_013362812 | IS5-like element IS903B family transposase | - |
| LVJ43_RS25840 (LVJ43_25810) | 66360..67091 | + | 732 | WP_021559024 | conjugal transfer complement resistance protein TraT | - |
| LVJ43_RS25845 (LVJ43_25815) | 67294..68031 | + | 738 | WP_015059020 | hypothetical protein | - |
| LVJ43_RS25850 (LVJ43_25820) | 68082..70289 | + | 2208 | WP_021573169 | type IV conjugative transfer system coupling protein TraD | virb4 |