T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 88729..115079
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV236_RS22990 (HV236_23000) | 88729..90930 | - | 2202 | WP_023307203 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HV236_RS23000 (HV236_23010) | 92322..92963 | - | 642 | WP_181522284 | tetratricopeptide repeat protein | - |
| HV236_RS23005 (HV236_23015) | 93038..93469 | - | 432 | WP_008324118 | entry exclusion protein | - |
| HV236_RS23010 (HV236_23020) | 93491..96313 | - | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HV236_RS23015 (HV236_23025) | 96313..97683 | - | 1371 | WP_008324121 | conjugal transfer pilus assembly protein TraH | traH |
| HV236_RS23020 (HV236_23030) | 97670..98098 | - | 429 | WP_008324122 | hypothetical protein | - |
| HV236_RS23025 (HV236_23035) | 98091..98645 | - | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HV236_RS23030 (HV236_23040) | 98635..98883 | - | 249 | WP_008324126 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV236_RS23035 (HV236_23045) | 98900..99649 | - | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HV236_RS23040 (HV236_23050) | 99680..99868 | - | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| HV236_RS23045 (HV236_23055) | 99900..101753 | - | 1854 | WP_022652255 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HV236_RS23050 (HV236_23060) | 101750..102379 | - | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HV236_RS23055 (HV236_23065) | 102396..103382 | - | 987 | WP_032160671 | conjugal transfer pilus assembly protein TraU | traU |
| HV236_RS23060 (HV236_23070) | 103385..104032 | - | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| HV236_RS23065 (HV236_23075) | 104032..104379 | - | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| HV236_RS23070 (HV236_23080) | 104376..107006 | - | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| HV236_RS23075 (HV236_23085) | 106999..107565 | - | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| HV236_RS23080 (HV236_23090) | 107555..107956 | - | 402 | WP_008324137 | hypothetical protein | - |
| HV236_RS23085 (HV236_23095) | 107940..108125 | - | 186 | WP_008324139 | hypothetical protein | - |
| HV236_RS23090 (HV236_23100) | 108129..108353 | - | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| HV236_RS23095 (HV236_23105) | 108473..109012 | - | 540 | WP_181522285 | type IV conjugative transfer system lipoprotein TraV | traV |
| HV236_RS23100 (HV236_23110) | 109034..110428 | - | 1395 | WP_008324156 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HV236_RS23105 (HV236_23115) | 110415..111158 | - | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| HV236_RS23110 (HV236_23120) | 111145..111711 | - | 567 | WP_008324158 | type IV conjugative transfer system protein TraE | traE |
| HV236_RS23115 (HV236_23125) | 111726..112031 | - | 306 | WP_008324160 | type IV conjugative transfer system protein TraL | traL |
| HV236_RS23120 (HV236_23130) | 112182..112532 | - | 351 | WP_008324162 | type IV conjugative transfer system pilin TraA | - |
| HV236_RS23125 (HV236_23135) | 112590..112814 | - | 225 | WP_008324165 | TraY domain-containing protein | - |
| HV236_RS23130 (HV236_23140) | 112901..113590 | - | 690 | WP_008324166 | hypothetical protein | - |
| HV236_RS23135 (HV236_23145) | 113779..114171 | - | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HV236_RS23140 (HV236_23150) | 114603..115079 | + | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| HV236_RS23145 (HV236_23155) | 115126..115656 | - | 531 | WP_008324170 | antirestriction protein | - |
| HV236_RS23150 (HV236_23160) | 116283..117113 | - | 831 | WP_008324171 | N-6 DNA methylase | - |
| HV236_RS23155 (HV236_23165) | 117156..117419 | - | 264 | WP_008324174 | hypothetical protein | - |
| HV236_RS23160 (HV236_23170) | 117505..117849 | - | 345 | WP_008324177 | hypothetical protein | - |
| HV236_RS23165 (HV236_23175) | 117896..118183 | - | 288 | WP_008324178 | hypothetical protein | - |
| HV236_RS23170 (HV236_23180) | 118237..118611 | - | 375 | WP_008324180 | hypothetical protein | - |
| HV236_RS23175 (HV236_23185) | 119238..119597 | - | 360 | WP_008324181 | hypothetical protein | - |
| HV236_RS23180 (HV236_23190) | 119659..119982 | - | 324 | WP_008324183 | hypothetical protein | - |