T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 31648..51587
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PWA42_RS13310 (PWA42_13310) | 27593..28702 | - | 1110 | WP_223603198 | ATP-binding protein | - |
| PWA42_RS13315 (PWA42_13315) | 29110..29504 | - | 395 | Protein_24 | hypothetical protein | - |
| PWA42_RS13320 (PWA42_13320) | 29553..30152 | - | 600 | WP_142967644 | site-specific integrase | - |
| PWA42_RS13325 (PWA42_13325) | 30576..31535 | - | 960 | Protein_26 | IS256-like element ISEfm2 family transposase | - |
| PWA42_RS13330 (PWA42_13330) | 31648..32541 | - | 894 | WP_274875499 | LPXTG cell wall anchor domain-containing protein | prgC |
| PWA42_RS13335 (PWA42_13335) | 32953..36051 | - | 3099 | WP_129984717 | type I restriction endonuclease subunit R | - |
| PWA42_RS13340 (PWA42_13340) | 36054..37223 | - | 1170 | WP_231450768 | restriction endonuclease subunit S | - |
| PWA42_RS13345 (PWA42_13345) | 37220..38767 | - | 1548 | WP_108173618 | type I restriction-modification system subunit M | - |
| PWA42_RS13350 (PWA42_13350) | 39260..39505 | - | 246 | WP_108173619 | restriction endonuclease subunit S | - |
| PWA42_RS13355 (PWA42_13355) | 39752..40129 | + | 378 | WP_002339800 | hypothetical protein | - |
| PWA42_RS13360 (PWA42_13360) | 40189..40542 | - | 354 | WP_002301645 | hypothetical protein | - |
| PWA42_RS13365 (PWA42_13365) | 40571..41539 | - | 969 | WP_113795146 | hypothetical protein | - |
| PWA42_RS13370 (PWA42_13370) | 41556..42500 | - | 945 | WP_274875492 | conjugal transfer protein TrbL family protein | trsL |
| PWA42_RS13375 (PWA42_13375) | 42500..43423 | - | 924 | WP_274875493 | hypothetical protein | traP |
| PWA42_RS13380 (PWA42_13380) | 43441..45096 | - | 1656 | WP_274875494 | VirD4-like conjugal transfer protein, CD1115 family | - |
| PWA42_RS13385 (PWA42_13385) | 45089..45520 | - | 432 | WP_002338759 | hypothetical protein | - |
| PWA42_RS13390 (PWA42_13390) | 45525..46076 | - | 552 | WP_274875495 | hypothetical protein | - |
| PWA42_RS13395 (PWA42_13395) | 46089..47198 | - | 1110 | WP_002332647 | lysozyme family protein | orf14 |
| PWA42_RS13400 (PWA42_13400) | 47220..48572 | - | 1353 | WP_274875496 | conjugal transfer protein TraF | trsF |
| PWA42_RS13405 (PWA42_13405) | 48586..50547 | - | 1962 | WP_231428364 | TrsE protein | virb4 |
| PWA42_RS13410 (PWA42_13410) | 50558..51187 | - | 630 | WP_104888277 | hypothetical protein | trsD |
| PWA42_RS13415 (PWA42_13415) | 51204..51587 | - | 384 | WP_001083514 | glycosyl transferase | trsC |
| PWA42_RS13420 (PWA42_13420) | 51606..51938 | - | 333 | WP_000713503 | CagC family type IV secretion system protein | - |
| PWA42_RS13425 (PWA42_13425) | 51962..53947 | - | 1986 | WP_233701194 | MobQ family relaxase | - |
| PWA42_RS13430 (PWA42_13430) | 54239..54538 | + | 300 | WP_002325624 | hypothetical protein | - |
| PWA42_RS13435 (PWA42_13435) | 54541..54798 | + | 258 | WP_010717195 | hypothetical protein | - |
| PWA42_RS13440 (PWA42_13440) | 54828..55004 | - | 177 | WP_181728217 | hypothetical protein | - |
| PWA42_RS13445 (PWA42_13445) | 55076..55756 | - | 681 | WP_001015311 | IS6-like element IS1216 family transposase | - |