T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42444..52732
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCD49_RS26655 (LCD49_26720) | 37932..38792 | + | 861 | WP_000027057 | broad-spectrum class A beta-lactamase TEM-1 | - |
| LCD49_RS26660 (LCD49_26725) | 39051..39527 | + | 477 | WP_013023839 | WbuC family cupin fold metalloprotein | - |
| LCD49_RS26665 (LCD49_26730) | 39574..40449 | - | 876 | WP_011091028 | extended-spectrum class A beta-lactamase CTX-M-3 | - |
| LCD49_RS26670 (LCD49_26735) | 40784..42046 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| LCD49_RS26675 (LCD49_26740) | 42444..43445 | - | 1002 | WP_001076634 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LCD49_RS26680 (LCD49_26745) | 43496..44629 | - | 1134 | WP_000101920 | type IV secretion system protein VirB10 | virB10 |
| LCD49_RS26685 (LCD49_26750) | 44629..45516 | - | 888 | WP_000758230 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| LCD49_RS26690 (LCD49_26755) | 45527..46222 | - | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| LCD49_RS26955 | 46233..46364 | - | 132 | WP_032493177 | hypothetical protein | - |
| LCD49_RS26695 (LCD49_26760) | 46441..47478 | - | 1038 | WP_101972614 | type IV secretion system protein | virB6 |
| LCD49_RS26700 (LCD49_26765) | 47495..47737 | - | 243 | WP_000858958 | EexN family lipoprotein | - |
| LCD49_RS26705 (LCD49_26770) | 47747..48460 | - | 714 | WP_000644929 | type IV secretion system protein | virB5 |
| LCD49_RS26710 (LCD49_26775) | 48476..51049 | - | 2574 | WP_032493176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| LCD49_RS26715 (LCD49_26780) | 51050..51367 | - | 318 | WP_000462629 | VirB3 family type IV secretion system protein | virB3 |
| LCD49_RS26720 (LCD49_26785) | 51407..51703 | - | 297 | WP_015060075 | TrbC/VirB2 family protein | virB2 |
| LCD49_RS26725 (LCD49_26790) | 51950..52732 | - | 783 | WP_001642193 | lytic transglycosylase domain-containing protein | virB1 |
| LCD49_RS26730 (LCD49_26795) | 52832..53149 | + | 318 | WP_000960955 | H-NS family nucleoid-associated regulatory protein | - |
| LCD49_RS26735 (LCD49_26800) | 53153..53503 | + | 351 | WP_000528713 | hypothetical protein | - |
| LCD49_RS26740 (LCD49_26805) | 53500..53838 | + | 339 | WP_000040982 | hypothetical protein | - |
| LCD49_RS26745 (LCD49_26810) | 53842..54150 | + | 309 | WP_000733764 | hypothetical protein | - |
| LCD49_RS26750 (LCD49_26815) | 54435..54620 | + | 186 | WP_024562121 | ribbon-helix-helix domain-containing protein | - |
| LCD49_RS26755 (LCD49_26820) | 54617..55225 | - | 609 | WP_000275218 | recombinase family protein | - |
| LCD49_RS26760 (LCD49_26825) | 55391..55723 | - | 333 | WP_000140165 | hypothetical protein | - |