T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 242988..252195
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCD43_RS24285 (LCD43_24305) | 238098..238814 | - | 717 | WP_000838219 | zinc finger-like domain-containing protein | - |
| LCD43_RS24290 (LCD43_24310) | 238811..239011 | - | 201 | WP_000594930 | hypothetical protein | - |
| LCD43_RS24295 (LCD43_24315) | 239031..240083 | - | 1053 | WP_001065778 | hypothetical protein | - |
| LCD43_RS24300 (LCD43_24320) | 240560..241435 | + | 876 | WP_000594611 | RepB family plasmid replication initiator protein | - |
| LCD43_RS24305 (LCD43_24325) | 242584..242937 | + | 354 | WP_000423602 | hypothetical protein | - |
| LCD43_RS24310 (LCD43_24330) | 242955..243305 | + | 351 | WP_001447770 | type IV conjugative transfer system protein TraL | - |
| LCD43_RS24315 (LCD43_24335) | 243317..244105 | + | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| LCD43_RS24320 (LCD43_24340) | 244105..245376 | + | 1272 | WP_000592092 | type-F conjugative transfer system secretin TraK | traK |
| LCD43_RS24325 (LCD43_24345) | 245378..245839 | + | 462 | WP_000521242 | plasmid transfer protein HtdO | - |
| LCD43_RS24330 (LCD43_24350) | 245829..247184 | + | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| LCD43_RS24335 (LCD43_24355) | 247192..247674 | + | 483 | WP_000377632 | hypothetical protein | - |
| LCD43_RS24340 (LCD43_24360) | 247793..248545 | + | 753 | WP_182911723 | protein-disulfide isomerase HtdT | - |
| LCD43_RS24345 (LCD43_24365) | 248555..249505 | + | 951 | WP_001022588 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| LCD43_RS24350 (LCD43_24370) | 249514..252195 | + | 2682 | WP_000387412 | TraC family protein | virb4 |
| LCD43_RS24355 (LCD43_24375) | 254744..254905 | + | 162 | WP_001371949 | hypothetical protein | - |