T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2429..11636
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCD50_RS21970 (LCD50_22010) | 1..876 | + | 876 | WP_000594611 | RepB family plasmid replication initiator protein | - |
| LCD50_RS21975 (LCD50_22015) | 2025..2378 | + | 354 | WP_000423602 | hypothetical protein | - |
| LCD50_RS21980 (LCD50_22020) | 2396..2746 | + | 351 | WP_001447770 | type IV conjugative transfer system protein TraL | - |
| LCD50_RS21985 (LCD50_22025) | 2758..3546 | + | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| LCD50_RS21990 (LCD50_22030) | 3546..4817 | + | 1272 | WP_000592092 | type-F conjugative transfer system secretin TraK | traK |
| LCD50_RS21995 (LCD50_22035) | 4819..5280 | + | 462 | WP_000521242 | plasmid transfer protein HtdO | - |
| LCD50_RS22000 (LCD50_22040) | 5270..6625 | + | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| LCD50_RS22005 (LCD50_22045) | 6633..7115 | + | 483 | WP_000377632 | hypothetical protein | - |
| LCD50_RS22010 (LCD50_22050) | 7234..7986 | + | 753 | WP_182911723 | protein-disulfide isomerase HtdT | - |
| LCD50_RS22015 (LCD50_22055) | 7996..8946 | + | 951 | WP_001022588 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| LCD50_RS22020 (LCD50_22060) | 8955..11636 | + | 2682 | WP_000387412 | TraC family protein | virb4 |
| LCD50_RS22025 (LCD50_22065) | 14185..14346 | + | 162 | WP_001371949 | hypothetical protein | - |