T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2690..29071
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE88_RS24755 (FNE88_25220) | 659..1042 | + | 384 | WP_040100321 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FNE88_RS24760 (FNE88_25230) | 2049..2276 | + | 228 | WP_072039828 | conjugal transfer relaxosome protein TraY | - |
| FNE88_RS24765 (FNE88_25235) | 2310..2675 | + | 366 | WP_040100313 | type IV conjugative transfer system pilin TraA | - |
| FNE88_RS24770 (FNE88_25240) | 2690..3001 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| FNE88_RS24775 (FNE88_25245) | 3023..3590 | + | 568 | Protein_5 | type IV conjugative transfer system protein TraE | - |
| FNE88_RS24780 (FNE88_25250) | 3577..4306 | + | 730 | Protein_6 | type-F conjugative transfer system secretin TraK | - |
| FNE88_RS24785 (FNE88_25255) | 4306..5733 | + | 1428 | WP_000146635 | F-type conjugal transfer pilus assembly protein TraB | traB |
| FNE88_RS24790 (FNE88_25260) | 5723..6314 | + | 592 | Protein_8 | conjugal transfer pilus-stabilizing protein TraP | - |
| FNE88_RS24795 (FNE88_25265) | 6301..6621 | + | 321 | WP_249418243 | conjugal transfer protein TrbD | - |
| FNE88_RS24800 (FNE88_25270) | 6618..7133 | + | 516 | WP_105466871 | type IV conjugative transfer system lipoprotein TraV | traV |
| FNE88_RS24805 (FNE88_25275) | 7267..7488 | + | 222 | WP_105466872 | conjugal transfer protein TraR | - |
| FNE88_RS24810 (FNE88_25280) | 7481..7955 | + | 475 | Protein_12 | hypothetical protein | - |
| FNE88_RS24815 (FNE88_25285) | 8035..8253 | + | 219 | WP_001377841 | hypothetical protein | - |
| FNE88_RS24820 (FNE88_25290) | 8250..8654 | + | 405 | WP_105466874 | hypothetical protein | - |
| FNE88_RS24825 (FNE88_25295) | 8651..8998 | + | 348 | WP_105466875 | hypothetical protein | - |
| FNE88_RS24830 (FNE88_25300) | 9124..11769 | + | 2646 | WP_105466876 | type IV secretion system protein TraC | virb4 |
| FNE88_RS24835 (FNE88_25305) | 11792..12208 | + | 417 | WP_124062645 | hypothetical protein | - |
| FNE88_RS24840 (FNE88_25310) | 12152..13258 | - | 1107 | WP_040100307 | hypothetical protein | - |
| FNE88_RS24845 (FNE88_25315) | 13342..13722 | + | 381 | WP_040100306 | type-F conjugative transfer system protein TrbI | - |
| FNE88_RS24850 (FNE88_25320) | 13719..14351 | + | 633 | WP_040100303 | type-F conjugative transfer system protein TraW | traW |
| FNE88_RS24855 (FNE88_25325) | 14348..15340 | + | 993 | WP_040100302 | conjugal transfer pilus assembly protein TraU | traU |
| FNE88_RS24860 (FNE88_25330) | 15349..15987 | + | 639 | WP_000777692 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| FNE88_RS24865 (FNE88_25335) | 15984..17792 | + | 1809 | WP_000821840 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| FNE88_RS24870 (FNE88_25340) | 17819..18076 | + | 258 | WP_053264198 | conjugal transfer protein TrbE | - |
| FNE88_RS24875 (FNE88_25345) | 18069..18812 | + | 744 | WP_001030378 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| FNE88_RS24880 (FNE88_25350) | 18973..19209 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE88_RS24885 (FNE88_25355) | 19196..19741 | + | 546 | WP_000059821 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| FNE88_RS24890 (FNE88_25360) | 19671..20012 | + | 342 | WP_161622486 | P-type conjugative transfer protein TrbJ | - |
| FNE88_RS24895 (FNE88_25365) | 19999..20391 | + | 393 | WP_215424252 | F-type conjugal transfer protein TrbF | - |
| FNE88_RS24900 (FNE88_25370) | 20378..21751 | + | 1374 | WP_077170481 | conjugal transfer pilus assembly protein TraH | traH |
| FNE88_RS24905 (FNE88_25375) | 21748..24567 | + | 2820 | WP_151674034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| FNE88_RS24910 (FNE88_25380) | 24592..25089 | + | 498 | WP_137546094 | surface exclusion protein | - |
| FNE88_RS24915 (FNE88_25385) | 25121..25852 | + | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| FNE88_RS24920 (FNE88_25390) | 26055..26795 | + | 741 | WP_151674032 | hypothetical protein | - |
| FNE88_RS24925 (FNE88_25395) | 26846..29071 | + | 2226 | WP_161622487 | type IV conjugative transfer system coupling protein TraD | prgC |