T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 6837..42980
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE88_RS24300 (FNE88_24700) | 1912..2964 | + | 1053 | WP_148116004 | type IV pilus biogenesis lipoprotein PilL | - |
| FNE88_RS24305 (FNE88_24705) | 2964..3401 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| FNE88_RS24310 (FNE88_24710) | 3415..5098 | + | 1684 | Protein_5 | PilN family type IVB pilus formation outer membrane protein | - |
| FNE88_RS24315 (FNE88_24715) | 5091..6386 | + | 1296 | WP_001545757 | type 4b pilus protein PilO2 | - |
| FNE88_RS24320 (FNE88_24720) | 6373..6826 | + | 454 | Protein_7 | type IV pilus biogenesis protein PilP | - |
| FNE88_RS24325 (FNE88_24725) | 6837..8390 | + | 1554 | WP_000362206 | ATPase, T2SS/T4P/T4SS family | virB11 |
| FNE88_RS24330 (FNE88_24730) | 8403..9488 | + | 1086 | WP_001208802 | type II secretion system F family protein | - |
| FNE88_RS24335 (FNE88_24735) | 9505..10119 | + | 615 | WP_000908226 | type 4 pilus major pilin | - |
| FNE88_RS24340 (FNE88_24740) | 10129..10689 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| FNE88_RS24345 (FNE88_24745) | 10674..11330 | + | 657 | WP_001193549 | A24 family peptidase | - |
| FNE88_RS24350 (FNE88_24750) | 11330..12622 | + | 1293 | WP_001350014 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| FNE88_RS24355 (FNE88_24755) | 12679..12804 | - | 126 | Protein_14 | RNA-guided endonuclease TnpB family protein | - |
| FNE88_RS24360 (FNE88_24760) | 13012..13836 | + | 825 | WP_161622484 | conjugal transfer protein TraE | traE |
| FNE88_RS24365 (FNE88_24765) | 13922..15124 | + | 1203 | WP_000976348 | conjugal transfer protein TraF | - |
| FNE88_RS24370 (FNE88_24770) | 15184..15768 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| FNE88_RS24375 (FNE88_24775) | 16163..16621 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| FNE88_RS24380 (FNE88_24780) | 16618..17436 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| FNE88_RS24385 (FNE88_24785) | 17433..18581 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| FNE88_RS24390 (FNE88_24790) | 18578..18868 | + | 291 | WP_001299214 | hypothetical protein | traK |
| FNE88_RS24395 (FNE88_24795) | 18883..19434 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| FNE88_RS24400 (FNE88_24800) | 19524..23291 | + | 3768 | WP_001141542 | LPD7 domain-containing protein | - |
| FNE88_RS24405 (FNE88_24805) | 23309..23656 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| FNE88_RS24410 (FNE88_24810) | 23653..24345 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| FNE88_RS24415 (FNE88_24815) | 24356..25339 | + | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| FNE88_RS24420 (FNE88_24820) | 25342..26631 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| FNE88_RS24425 (FNE88_24825) | 26631..27335 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| FNE88_RS24430 (FNE88_24830) | 27335..27862 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| FNE88_RS24435 (FNE88_24835) | 27913..28317 | + | 405 | WP_000086961 | IncI1-type conjugal transfer protein TraR | traR |
| FNE88_RS24440 (FNE88_24840) | 28381..28569 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| FNE88_RS24445 (FNE88_24845) | 28553..29353 | + | 801 | WP_094337646 | IncI1-type conjugal transfer protein TraT | traT |
| FNE88_RS24450 (FNE88_24850) | 29443..32487 | + | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| FNE88_RS24455 (FNE88_24855) | 32487..33101 | + | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| FNE88_RS24460 (FNE88_24860) | 33068..34270 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| FNE88_RS24465 (FNE88_24865) | 34299..34883 | + | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| FNE88_RS24470 (FNE88_24870) | 34980..37148 | + | 2169 | WP_000698357 | DotA/TraY family protein | traY |
| FNE88_RS24475 (FNE88_24875) | 37222..37872 | + | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| FNE88_RS24480 (FNE88_24880) | 37944..38153 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| FNE88_RS25935 | 38545..38721 | + | 177 | WP_001054904 | hypothetical protein | - |
| FNE88_RS26525 | 38786..38881 | - | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| FNE88_RS24485 (FNE88_24885) | 39513..40421 | + | 909 | WP_000055084 | hypothetical protein | - |
| FNE88_RS24490 (FNE88_24890) | 40683..41891 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| FNE88_RS24495 (FNE88_24895) | 41910..42980 | + | 1071 | WP_000151577 | IncI1-type conjugal transfer protein TrbB | trbB |
| FNE88_RS24500 (FNE88_24900) | 42973..45264 | + | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |