T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 71219..108793
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0366_RS00430 (D0366_00085) | 68935..71226 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| D0366_RS00435 (D0366_00086) | 71219..72289 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| D0366_RS00440 (D0366_00087) | 72308..73516 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| D0366_RS00445 (D0366_00088) | 73808..73960 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| D0366_RS00450 (D0366_00089) | 74032..74283 | - | 252 | WP_001291964 | hypothetical protein | - |
| D0366_RS00670 | 74781..74876 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| D0366_RS00455 | 74941..75225 | - | 285 | WP_031942457 | hypothetical protein | - |
| D0366_RS00460 (D0366_00091) | 75509..75718 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| D0366_RS00465 (D0366_00092) | 75790..76440 | - | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| D0366_RS00470 (D0366_00093) | 76514..78682 | - | 2169 | WP_021537350 | DotA/TraY family protein | traY |
| D0366_RS00475 (D0366_00094) | 78779..79363 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| D0366_RS00480 (D0366_00095) | 79392..80594 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| D0366_RS00485 (D0366_00096) | 80561..81175 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| D0366_RS00490 (D0366_00097) | 81175..84219 | - | 3045 | WP_021265678 | IncI1-type conjugal transfer protein TraU | traU |
| D0366_RS00495 (D0366_00098) | 84309..85109 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| D0366_RS00500 | 85093..85280 | - | 188 | Protein_99 | putative conjugal transfer protein TraS | - |
| D0366_RS00505 (D0366_00099) | 85344..85748 | - | 405 | WP_000086958 | IncI1-type conjugal transfer protein TraR | traR |
| D0366_RS00510 (D0366_00100) | 85799..86326 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| D0366_RS00515 (D0366_00101) | 86326..87030 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| D0366_RS00520 (D0366_00102) | 87030..88319 | - | 1290 | WP_001272003 | conjugal transfer protein TraO | traO |
| D0366_RS00525 (D0366_00103) | 88322..89305 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| D0366_RS00530 (D0366_00104) | 89316..90008 | - | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| D0366_RS00535 (D0366_00105) | 90005..90352 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| D0366_RS00540 | 90370..94136 | - | 3767 | Protein_107 | LPD7 domain-containing protein | - |
| D0366_RS00545 (D0366_00108) | 94225..94776 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| D0366_RS00550 (D0366_00109) | 94791..95081 | - | 291 | WP_001299214 | hypothetical protein | traK |
| D0366_RS00555 (D0366_00110) | 95078..96226 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| D0366_RS00560 (D0366_00111) | 96223..97041 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| D0366_RS00565 (D0366_00112) | 97038..97496 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| D0366_RS00570 (D0366_00113) | 97891..98475 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| D0366_RS00575 (D0366_00114) | 98535..99737 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| D0366_RS00580 (D0366_00115) | 99822..100646 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| D0366_RS00585 (D0366_00116) | 100797..101951 | - | 1155 | WP_001139957 | site-specific integrase | - |
| D0366_RS00660 | 101935..102234 | + | 300 | WP_223873359 | pilus assembly protein PilV | - |
| D0366_RS00595 | 102609..102857 | + | 249 | WP_001349157 | hypothetical protein | - |
| D0366_RS00690 | 102854..103078 | - | 225 | Protein_119 | hypothetical protein | - |
| D0366_RS00665 | 103351..103560 | - | 210 | Protein_120 | hypothetical protein | - |
| D0366_RS00605 (D0366_00118) | 103560..103904 | + | 345 | Protein_121 | WbuC family cupin fold metalloprotein | - |
| D0366_RS00610 (D0366_00119) | 103951..104826 | - | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| D0366_RS00615 (D0366_00120) | 105114..106376 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| D0366_RS00620 (D0366_00121) | 106594..107688 | - | 1095 | Protein_124 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| D0366_RS00625 (D0366_00122) | 107688..108344 | - | 657 | WP_001193553 | prepilin peptidase | - |
| D0366_RS00630 | 108329..108793 | - | 465 | WP_042004728 | lytic transglycosylase domain-containing protein | virB1 |