T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 99276..127258
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CN260_RS29195 (CN260_29050) | 94466..95341 | + | 876 | WP_060415463 | DUF4942 domain-containing protein | - |
| CN260_RS29210 (CN260_29065) | 96121..96459 | + | 339 | WP_020804855 | hypothetical protein | - |
| CN260_RS29215 (CN260_29070) | 96516..96863 | + | 348 | WP_064182675 | hypothetical protein | - |
| CN260_RS29220 (CN260_29075) | 96952..97182 | + | 231 | WP_060415465 | hypothetical protein | - |
| CN260_RS29225 (CN260_29080) | 97229..98062 | + | 834 | WP_060415466 | N-6 DNA methylase | - |
| CN260_RS30925 | 98348..98716 | - | 369 | WP_080848162 | hypothetical protein | - |
| CN260_RS29230 (CN260_29085) | 98711..99253 | + | 543 | WP_060415467 | antirestriction protein | - |
| CN260_RS29235 (CN260_29090) | 99276..99698 | - | 423 | WP_073972322 | transglycosylase SLT domain-containing protein | virB1 |
| CN260_RS29240 (CN260_29095) | 100202..100594 | + | 393 | WP_020805752 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CN260_RS31940 | 100832..101533 | + | 702 | WP_223174962 | hypothetical protein | - |
| CN260_RS29250 (CN260_29105) | 101619..101819 | + | 201 | WP_048289787 | TraY domain-containing protein | - |
| CN260_RS29255 (CN260_29110) | 101888..102256 | + | 369 | WP_064343525 | type IV conjugative transfer system pilin TraA | - |
| CN260_RS29260 (CN260_29115) | 102270..102575 | + | 306 | WP_064343526 | type IV conjugative transfer system protein TraL | traL |
| CN260_RS29265 (CN260_29120) | 102591..103157 | + | 567 | WP_064359954 | type IV conjugative transfer system protein TraE | traE |
| CN260_RS29270 (CN260_29125) | 103144..103878 | + | 735 | WP_064343528 | type-F conjugative transfer system secretin TraK | traK |
| CN260_RS29275 (CN260_29130) | 103878..105299 | + | 1422 | WP_053390199 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CN260_RS29280 (CN260_29135) | 105292..105726 | + | 435 | WP_020322358 | conjugal transfer protein TraP | - |
| CN260_RS29285 (CN260_29140) | 105760..106344 | + | 585 | WP_064343530 | type IV conjugative transfer system lipoprotein TraV | traV |
| CN260_RS29300 (CN260_29155) | 106957..107145 | + | 189 | WP_053390286 | hypothetical protein | - |
| CN260_RS31945 | 107229..107630 | + | 402 | WP_064343532 | hypothetical protein | - |
| CN260_RS29310 (CN260_29165) | 107627..107926 | + | 300 | WP_053390308 | hypothetical protein | - |
| CN260_RS29315 (CN260_29170) | 108014..108397 | + | 384 | WP_042946290 | hypothetical protein | - |
| CN260_RS29320 (CN260_29175) | 108490..111129 | + | 2640 | WP_064343533 | type IV secretion system protein TraC | virb4 |
| CN260_RS29325 (CN260_29180) | 111129..111521 | + | 393 | WP_117977340 | type-F conjugative transfer system protein TrbI | - |
| CN260_RS29330 (CN260_29185) | 111518..112144 | + | 627 | WP_064343535 | type-F conjugative transfer system protein TraW | traW |
| CN260_RS29335 (CN260_29190) | 112188..113147 | + | 960 | WP_229295972 | conjugal transfer pilus assembly protein TraU | traU |
| CN260_RS29340 (CN260_29195) | 113160..113807 | + | 648 | WP_064343536 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CN260_RS29345 (CN260_29200) | 113804..114187 | + | 384 | WP_053390297 | hypothetical protein | - |
| CN260_RS29350 (CN260_29205) | 114184..116139 | + | 1956 | WP_082226156 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CN260_RS29355 (CN260_29210) | 116171..116431 | + | 261 | WP_053390216 | hypothetical protein | - |
| CN260_RS29360 (CN260_29215) | 116424..117035 | + | 612 | WP_117977341 | hypothetical protein | - |
| CN260_RS29365 (CN260_29220) | 117025..117267 | + | 243 | WP_082226157 | conjugal transfer protein TrbE | - |
| CN260_RS29370 (CN260_29225) | 117313..117639 | + | 327 | WP_053390219 | hypothetical protein | - |
| CN260_RS29375 (CN260_29230) | 117660..118412 | + | 753 | WP_053390220 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CN260_RS29380 (CN260_29235) | 118423..118659 | + | 237 | WP_053390221 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CN260_RS29385 (CN260_29240) | 118634..119194 | + | 561 | WP_039698500 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CN260_RS29390 (CN260_29245) | 119181..120551 | + | 1371 | WP_049078362 | conjugal transfer pilus assembly protein TraH | traH |
| CN260_RS29395 (CN260_29250) | 120551..123394 | + | 2844 | WP_049078361 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CN260_RS29400 (CN260_29255) | 123400..123915 | + | 516 | WP_049078360 | conjugal transfer protein TraS | - |
| CN260_RS29405 (CN260_29260) | 123978..124724 | + | 747 | WP_049078359 | hypothetical protein | - |
| CN260_RS29410 (CN260_29265) | 124964..127258 | + | 2295 | WP_080848157 | type IV conjugative transfer system coupling protein TraD | virb4 |