T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51581..88793
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOF66_RS25900 (LOF66_25770) | 49297..51588 | - | 2292 | WP_001289269 | F-type conjugative transfer protein TrbC | - |
| LOF66_RS25905 (LOF66_25775) | 51581..52651 | - | 1071 | WP_000151576 | IncI1-type conjugal transfer protein TrbB | trbB |
| LOF66_RS25910 (LOF66_25780) | 52670..53878 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| LOF66_RS25915 (LOF66_25785) | 54170..54322 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| LOF66_RS25920 (LOF66_25790) | 54394..54645 | - | 252 | WP_001291965 | hypothetical protein | - |
| LOF66_RS25925 (LOF66_25795) | 55569..55745 | - | 177 | WP_001054900 | hypothetical protein | - |
| LOF66_RS25930 (LOF66_25800) | 56137..56346 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| LOF66_RS25935 (LOF66_25805) | 56418..57080 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LOF66_RS25940 (LOF66_25810) | 57151..59319 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| LOF66_RS25945 (LOF66_25815) | 59416..60000 | - | 585 | WP_001037985 | IncI1-type conjugal transfer protein TraX | - |
| LOF66_RS25950 (LOF66_25820) | 60029..61231 | - | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| LOF66_RS25955 (LOF66_25825) | 61198..61812 | - | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| LOF66_RS25960 (LOF66_25830) | 61812..64856 | - | 3045 | WP_044502553 | IncI1-type conjugal transfer protein TraU | traU |
| LOF66_RS25965 (LOF66_25835) | 64946..65746 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| LOF66_RS25970 (LOF66_25840) | 65730..65918 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| LOF66_RS25975 (LOF66_25845) | 65982..66386 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| LOF66_RS25980 (LOF66_25850) | 66437..66964 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| LOF66_RS25985 (LOF66_25855) | 66964..67668 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| LOF66_RS25990 (LOF66_25860) | 67668..68957 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| LOF66_RS25995 (LOF66_25865) | 68960..69943 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| LOF66_RS26000 (LOF66_25870) | 69954..70646 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| LOF66_RS26005 (LOF66_25875) | 70643..70990 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| LOF66_RS26010 (LOF66_25880) | 71008..74775 | - | 3768 | WP_001141534 | LPD7 domain-containing protein | - |
| LOF66_RS26015 (LOF66_25885) | 74865..75416 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| LOF66_RS26020 (LOF66_25890) | 75431..75721 | - | 291 | WP_114443197 | conjugal transfer protein | traK |
| LOF66_RS26025 (LOF66_25895) | 75718..76866 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| LOF66_RS26030 (LOF66_25900) | 76863..77681 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| LOF66_RS26035 (LOF66_25905) | 77678..78136 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| LOF66_RS26040 (LOF66_25910) | 78531..79115 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| LOF66_RS26045 (LOF66_25915) | 79175..80377 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| LOF66_RS26050 (LOF66_25920) | 80463..81287 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| LOF66_RS26055 (LOF66_25925) | 81438..82592 | - | 1155 | WP_001139958 | site-specific integrase | - |
| LOF66_RS26060 (LOF66_25930) | 82591..82998 | + | 408 | WP_003552681 | hypothetical protein | - |
| LOF66_RS26065 (LOF66_25935) | 82995..84287 | - | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LOF66_RS26070 (LOF66_25940) | 84287..84943 | - | 657 | WP_001193554 | prepilin peptidase | - |
| LOF66_RS26075 (LOF66_25945) | 84928..85488 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| LOF66_RS26080 (LOF66_25950) | 85498..86112 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| LOF66_RS26085 (LOF66_25955) | 86130..87227 | - | 1098 | WP_044502562 | type II secretion system F family protein | - |
| LOF66_RS26090 (LOF66_25960) | 87240..88793 | - | 1554 | WP_044502561 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LOF66_RS26095 (LOF66_25965) | 88804..89256 | - | 453 | WP_044502560 | type IV pilus biogenesis protein PilP | - |
| LOF66_RS26100 (LOF66_25970) | 89243..90538 | - | 1296 | WP_044502559 | type 4b pilus protein PilO2 | - |
| LOF66_RS26105 (LOF66_25975) | 90531..92213 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| LOF66_RS26110 (LOF66_25980) | 92227..92664 | - | 438 | WP_000539806 | type IV pilus biogenesis protein PilM | - |
| LOF66_RS26115 (LOF66_25985) | 92664..93731 | - | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |