T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 69208..95748
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOF66_RS25210 (LOF66_25080) | 69208..71379 | - | 2172 | WP_274480480 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LOF66_RS25215 (LOF66_25085) | 71631..72362 | - | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| LOF66_RS25220 (LOF66_25090) | 72376..72886 | - | 511 | Protein_71 | conjugal transfer entry exclusion protein TraS | - |
| LOF66_RS25225 (LOF66_25095) | 72883..75708 | - | 2826 | WP_274480482 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LOF66_RS25230 (LOF66_25100) | 75705..77078 | - | 1374 | WP_001137358 | conjugal transfer pilus assembly protein TraH | traH |
| LOF66_RS25235 (LOF66_25105) | 77078..77440 | - | 363 | WP_002430925 | P-type conjugative transfer protein TrbJ | - |
| LOF66_RS25240 (LOF66_25110) | 77370..77915 | - | 546 | WP_000052618 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LOF66_RS25245 (LOF66_25115) | 77902..78186 | - | 285 | WP_000624110 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LOF66_RS25250 (LOF66_25120) | 78305..78652 | - | 348 | WP_001287677 | conjugal transfer protein TrbA | - |
| LOF66_RS25255 (LOF66_25125) | 78668..79411 | - | 744 | WP_001030376 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LOF66_RS25260 (LOF66_25130) | 79404..79661 | - | 258 | WP_000864325 | conjugal transfer protein TrbE | - |
| LOF66_RS25265 (LOF66_25135) | 79688..81496 | - | 1809 | WP_001567342 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LOF66_RS25270 (LOF66_25140) | 81493..82131 | - | 639 | WP_059277995 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LOF66_RS25275 (LOF66_25145) | 82140..83132 | - | 993 | WP_001712363 | conjugal transfer pilus assembly protein TraU | traU |
| LOF66_RS25280 (LOF66_25150) | 83129..83761 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| LOF66_RS25285 (LOF66_25155) | 83758..84144 | - | 387 | WP_000099690 | type-F conjugative transfer system protein TrbI | - |
| LOF66_RS25290 (LOF66_25160) | 84141..86771 | - | 2631 | WP_000069766 | type IV secretion system protein TraC | virb4 |
| LOF66_RS25295 (LOF66_25165) | 86898..87245 | - | 348 | WP_000802783 | hypothetical protein | - |
| LOF66_RS25300 (LOF66_25170) | 87273..87490 | - | 218 | Protein_87 | hypothetical protein | - |
| LOF66_RS25305 (LOF66_25175) | 87570..88046 | - | 477 | WP_000549579 | hypothetical protein | - |
| LOF66_RS25310 (LOF66_25180) | 88039..88260 | - | 222 | WP_113931172 | conjugal transfer protein TraR | - |
| LOF66_RS25315 (LOF66_25185) | 88395..88910 | - | 516 | WP_113931173 | type IV conjugative transfer system lipoprotein TraV | traV |
| LOF66_RS25320 (LOF66_25190) | 88907..89227 | - | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| LOF66_RS25325 (LOF66_25195) | 89214..89804 | - | 591 | WP_000002784 | conjugal transfer pilus-stabilizing protein TraP | - |
| LOF66_RS25330 (LOF66_25200) | 89794..91221 | - | 1428 | WP_000146657 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LOF66_RS25335 (LOF66_25205) | 91221..91949 | - | 729 | WP_001230798 | type-F conjugative transfer system secretin TraK | traK |
| LOF66_RS25340 (LOF66_25210) | 91936..92502 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| LOF66_RS25345 (LOF66_25215) | 92524..92835 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| LOF66_RS25350 (LOF66_25220) | 92850..93209 | - | 360 | WP_000340272 | type IV conjugative transfer system pilin TraA | - |
| LOF66_RS25355 (LOF66_25225) | 93243..93470 | - | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| LOF66_RS25360 (LOF66_25230) | 93564..94250 | - | 687 | WP_000332484 | PAS domain-containing protein | - |
| LOF66_RS25365 (LOF66_25235) | 94441..94824 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LOF66_RS25370 (LOF66_25240) | 95101..95748 | + | 648 | WP_133301285 | transglycosylase SLT domain-containing protein | virB1 |
| LOF66_RS25375 (LOF66_25245) | 96045..96866 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| LOF66_RS25380 (LOF66_25250) | 96987..97274 | - | 288 | WP_000107535 | hypothetical protein | - |
| LOF66_RS25385 (LOF66_25255) | 97299..97505 | - | 207 | WP_000547939 | hypothetical protein | - |
| LOF66_RS25390 (LOF66_25260) | 97575..97748 | + | 174 | Protein_105 | hypothetical protein | - |
| LOF66_RS25395 (LOF66_25265) | 97746..97976 | - | 231 | WP_071587244 | hypothetical protein | - |
| LOF66_RS25400 (LOF66_25270) | 98196..98321 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| LOF66_RS25405 (LOF66_25275) | 98263..98412 | - | 150 | Protein_108 | plasmid maintenance protein Mok | - |
| LOF66_RS25410 (LOF66_25280) | 98434..98622 | + | 189 | WP_001299721 | hypothetical protein | - |
| LOF66_RS25415 (LOF66_25285) | 98591..99353 | - | 763 | Protein_110 | plasmid SOS inhibition protein A | - |
| LOF66_RS25420 (LOF66_25290) | 99350..99784 | - | 435 | WP_000845901 | conjugation system SOS inhibitor PsiB | - |