T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 120313..146453
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LO742_RS25715 (LO742_25690) | 119679..119906 | + | 228 | WP_000450520 | toxin-antitoxin system antitoxin VapB | - |
| LO742_RS25720 (LO742_25695) | 119906..120304 | + | 399 | WP_000911333 | tRNA(fMet)-specific endonuclease VapC | - |
| LO742_RS25725 (LO742_25700) | 120313..122466 | - | 2154 | WP_000009379 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LO742_RS25730 (LO742_25705) | 122719..123450 | - | 732 | WP_000850416 | conjugal transfer complement resistance protein TraT | - |
| LO742_RS25735 (LO742_25710) | 123464..123973 | - | 510 | WP_000628105 | conjugal transfer entry exclusion protein TraS | - |
| LO742_RS25740 (LO742_25715) | 123970..126795 | - | 2826 | WP_001007036 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LO742_RS25745 (LO742_25720) | 126792..128165 | - | 1374 | WP_000944319 | conjugal transfer pilus assembly protein TraH | traH |
| LO742_RS25750 (LO742_25725) | 128152..128544 | - | 393 | Protein_123 | F-type conjugal transfer protein TrbF | - |
| LO742_RS25755 (LO742_25730) | 128531..128872 | - | 342 | WP_001442101 | P-type conjugative transfer protein TrbJ | - |
| LO742_RS25760 (LO742_25735) | 128802..129347 | - | 546 | WP_000059833 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LO742_RS25765 (LO742_25740) | 129334..129618 | - | 285 | WP_000624108 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LO742_RS25770 (LO742_25745) | 129699..129974 | + | 276 | WP_001513501 | hypothetical protein | - |
| LO742_RS25775 (LO742_25750) | 129976..130323 | - | 348 | WP_001287907 | conjugal transfer protein TrbA | - |
| LO742_RS25780 (LO742_25755) | 130339..131082 | - | 744 | WP_001030378 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LO742_RS25785 (LO742_25760) | 131075..131332 | - | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| LO742_RS25790 (LO742_25765) | 131359..133167 | - | 1809 | WP_000821867 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LO742_RS25795 (LO742_25770) | 133164..133802 | - | 639 | WP_000777703 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LO742_RS25800 (LO742_25775) | 133811..134803 | - | 993 | WP_000830183 | conjugal transfer pilus assembly protein TraU | traU |
| LO742_RS25805 (LO742_25780) | 134800..135432 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| LO742_RS25810 (LO742_25785) | 135429..135815 | - | 387 | WP_000099688 | type-F conjugative transfer system protein TrbI | - |
| LO742_RS25815 (LO742_25790) | 135812..138439 | - | 2628 | WP_001064245 | type IV secretion system protein TraC | virb4 |
| LO742_RS25820 (LO742_25795) | 138599..138820 | - | 222 | WP_001278690 | conjugal transfer protein TraR | - |
| LO742_RS25825 (LO742_25800) | 138955..139470 | - | 516 | WP_000809834 | type IV conjugative transfer system lipoprotein TraV | traV |
| LO742_RS25830 (LO742_25805) | 139467..139718 | - | 252 | WP_001038351 | conjugal transfer protein TrbG | - |
| LO742_RS25835 (LO742_25810) | 139730..139927 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| LO742_RS25840 (LO742_25815) | 139914..140504 | - | 591 | WP_000002787 | conjugal transfer pilus-stabilizing protein TraP | - |
| LO742_RS25845 (LO742_25820) | 140494..141921 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LO742_RS25850 (LO742_25825) | 141921..142649 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| LO742_RS25855 (LO742_25830) | 142636..143202 | - | 567 | WP_000399774 | type IV conjugative transfer system protein TraE | traE |
| LO742_RS25860 (LO742_25835) | 143224..143535 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| LO742_RS25865 (LO742_25840) | 143550..143915 | - | 366 | WP_000340276 | type IV conjugative transfer system pilin TraA | - |
| LO742_RS25870 (LO742_25845) | 143949..144176 | - | 228 | WP_001442099 | conjugal transfer relaxosome protein TraY | - |
| LO742_RS25875 (LO742_25850) | 144270..144956 | - | 687 | WP_000332490 | PAS domain-containing protein | - |
| LO742_RS25880 (LO742_25855) | 145146..145529 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LO742_RS25885 (LO742_25860) | 145851..146453 | + | 603 | WP_023145258 | transglycosylase SLT domain-containing protein | virB1 |
| LO742_RS25890 (LO742_25865) | 146749..147570 | - | 822 | WP_001234485 | DUF932 domain-containing protein | - |
| LO742_RS25895 (LO742_25870) | 147689..147975 | - | 287 | Protein_152 | hypothetical protein | - |
| LO742_RS25900 (LO742_25875) | 147977..148298 | + | 322 | Protein_153 | hypothetical protein | - |
| LO742_RS25905 (LO742_25880) | 148599..148721 | - | 123 | WP_223195199 | Hok/Gef family protein | - |
| LO742_RS25910 (LO742_25885) | 148666..148818 | - | 153 | Protein_155 | DUF5431 family protein | - |
| LO742_RS25915 (LO742_25890) | 149035..149754 | - | 720 | WP_001276275 | plasmid SOS inhibition protein A | - |
| LO742_RS25920 (LO742_25895) | 149751..150185 | - | 435 | WP_000845935 | conjugation system SOS inhibitor PsiB | - |