T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 37161..64551
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9113_RS25325 (C9113_25350) | 36527..36754 | + | 228 | WP_000450527 | toxin-antitoxin system antitoxin VapB | - |
| C9113_RS25330 (C9113_25355) | 36754..37152 | + | 399 | WP_000911320 | type II toxin-antitoxin system VapC family toxin | - |
| C9113_RS25335 (C9113_25360) | 37161..39377 | - | 2217 | WP_136752083 | type IV conjugative transfer system coupling protein TraD | virb4 |
| C9113_RS25340 (C9113_25365) | 39434..40165 | - | 732 | WP_000199918 | hypothetical protein | - |
| C9113_RS25345 (C9113_25370) | 40341..41129 | - | 789 | WP_033817126 | hypothetical protein | - |
| C9113_RS25350 (C9113_25375) | 41297..41608 | + | 312 | WP_000522220 | heavy metal-binding domain-containing protein | - |
| C9113_RS25355 (C9113_25380) | 41611..44430 | - | 2820 | WP_136752084 | conjugal transfer mating-pair stabilization protein TraG | traG |
| C9113_RS25360 (C9113_25385) | 44427..45800 | - | 1374 | WP_000944332 | conjugal transfer pilus assembly protein TraH | traH |
| C9113_RS25365 (C9113_25390) | 45787..46179 | - | 393 | WP_000660704 | F-type conjugal transfer protein TrbF | - |
| C9113_RS25370 (C9113_25395) | 46160..46507 | - | 348 | WP_071532380 | P-type conjugative transfer protein TrbJ | - |
| C9113_RS25375 (C9113_25400) | 46437..46982 | - | 546 | WP_001457363 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| C9113_RS25380 (C9113_25405) | 46969..47256 | - | 288 | WP_000335420 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C9113_RS25385 (C9113_25410) | 47322..47723 | - | 402 | WP_044808433 | hypothetical protein | - |
| C9113_RS26665 (C9113_25415) | 47854..48218 | - | 365 | Protein_46 | hypothetical protein | - |
| C9113_RS25395 (C9113_25420) | 48232..48975 | - | 744 | WP_001030373 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| C9113_RS25400 (C9113_25425) | 48968..49225 | - | 258 | WP_000864346 | conjugal transfer protein TrbE | - |
| C9113_RS25405 (C9113_25430) | 49239..51143 | - | 1905 | WP_052079465 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| C9113_RS25410 (C9113_25435) | 51237..51617 | - | 381 | WP_032206670 | hypothetical protein | - |
| C9113_RS25415 (C9113_25440) | 51614..52252 | - | 639 | WP_001035184 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| C9113_RS25420 (C9113_25445) | 52536..52814 | - | 279 | WP_001365600 | hypothetical protein | - |
| C9113_RS25425 (C9113_25450) | 52841..52990 | - | 150 | Protein_53 | TraU family protein | - |
| C9113_RS25430 (C9113_25455) | 52994..53440 | - | 447 | WP_001289131 | hypothetical protein | - |
| C9113_RS25440 (C9113_25465) | 54167..54709 | - | 543 | WP_001365589 | hypothetical protein | - |
| C9113_RS25445 (C9113_25470) | 54723..55715 | - | 993 | WP_000817328 | conjugal transfer pilus assembly protein TraU | traU |
| C9113_RS25450 (C9113_25475) | 55712..56344 | - | 633 | WP_000877291 | type-F conjugative transfer system protein TraW | traW |
| C9113_RS25455 (C9113_25480) | 56341..56727 | - | 387 | WP_033817130 | type-F conjugative transfer system protein TrbI | - |
| C9113_RS25460 (C9113_25485) | 56724..59351 | - | 2628 | WP_052892069 | type IV secretion system protein TraC | virb4 |
| C9113_RS25465 (C9113_25490) | 59511..59732 | - | 222 | WP_001278980 | conjugal transfer protein TraR | - |
| C9113_RS25470 (C9113_25495) | 59867..60382 | - | 516 | WP_000809868 | type IV conjugative transfer system lipoprotein TraV | traV |
| C9113_RS25475 (C9113_25500) | 60379..60630 | - | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| C9113_RS25480 (C9113_25505) | 60623..60943 | - | 321 | WP_001057271 | DUF2689 domain-containing protein | virb4 |
| C9113_RS25485 (C9113_25510) | 60930..61517 | - | 588 | WP_000002898 | conjugal transfer pilus-stabilizing protein TraP | - |
| C9113_RS25490 (C9113_25515) | 61507..62937 | - | 1431 | WP_000146622 | F-type conjugal transfer pilus assembly protein TraB | traB |
| C9113_RS25495 (C9113_25520) | 62937..63665 | - | 729 | WP_001365587 | type-F conjugative transfer system secretin TraK | traK |
| C9113_RS25500 (C9113_25525) | 63652..64218 | - | 567 | WP_000399759 | type IV conjugative transfer system protein TraE | traE |
| C9113_RS25505 (C9113_25530) | 64240..64551 | - | 312 | WP_000012099 | type IV conjugative transfer system protein TraL | traL |
| C9113_RS25510 (C9113_25535) | 64566..64919 | - | 354 | WP_021521309 | type IV conjugative transfer system pilin TraA | - |
| C9113_RS25515 (C9113_25540) | 64954..65181 | - | 228 | WP_032142519 | conjugal transfer relaxosome protein TraY | - |
| C9113_RS25520 (C9113_25545) | 65269..65958 | - | 690 | WP_000332473 | PAS domain-containing protein | - |
| C9113_RS25525 (C9113_25550) | 66151..66534 | - | 384 | WP_001151560 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| C9113_RS25530 (C9113_25555) | 66819..67466 | + | 648 | WP_135301269 | transglycosylase SLT domain-containing protein | - |
| C9113_RS25535 (C9113_25560) | 67762..68583 | - | 822 | WP_052892104 | DUF932 domain-containing protein | - |
| C9113_RS25540 (C9113_25565) | 68702..68989 | - | 288 | WP_000107543 | hypothetical protein | - |
| C9113_RS25550 (C9113_25575) | 69145..69447 | - | 303 | WP_001272235 | hypothetical protein | - |