T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12834..39293
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS890_RS00055 (pSH696_117_16) | 12200..12427 | + | 228 | WP_000450520 | toxin-antitoxin system antitoxin VapB | - |
| HS890_RS00060 (pSH696_117_17) | 12427..12825 | + | 399 | WP_000911313 | type II toxin-antitoxin system VapC family toxin | - |
| HS890_RS00065 (pSH696_117_18) | 12834..14987 | - | 2154 | WP_000009324 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HS890_RS00070 (pSH696_117_19) | 15240..15953 | - | 714 | WP_029593828 | conjugal transfer complement resistance protein TraT | - |
| HS890_RS00075 (pSH696_117_21) | 16004..16501 | - | 498 | WP_000605859 | entry exclusion protein | - |
| HS890_RS00080 (pSH696_117_22) | 16517..19339 | - | 2823 | WP_001007016 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HS890_RS00085 (pSH696_117_23) | 19336..20712 | - | 1377 | WP_000982840 | conjugal transfer pilus assembly protein TraH | traH |
| HS890_RS00090 (pSH696_117_24) | 20709..21089 | - | 381 | WP_001366201 | F-type conjugal transfer protein TrbF | - |
| HS890_RS00095 (pSH696_117_25) | 21076..21417 | - | 342 | WP_001443031 | P-type conjugative transfer protein TrbJ | - |
| HS890_RS00100 (pSH696_117_26) | 21347..21892 | - | 546 | WP_000059851 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HS890_RS00105 (pSH696_117_27) | 21879..22163 | - | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HS890_RS00110 (pSH696_117_28) | 22244..22558 | + | 315 | WP_000415566 | protein ArtA | - |
| HS890_RS00115 (pSH696_117_29) | 22560..22907 | - | 348 | WP_001287910 | conjugal transfer protein TrbA | - |
| HS890_RS00120 (pSH696_117_30) | 22923..23666 | - | 744 | WP_001030378 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HS890_RS00125 (pSH696_117_31) | 23659..23916 | - | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| HS890_RS00130 (pSH696_117_32) | 23943..25751 | - | 1809 | WP_000821840 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HS890_RS00135 (pSH696_117_33) | 25748..26386 | - | 639 | WP_000777690 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HS890_RS00140 (pSH696_117_34) | 26395..27387 | - | 993 | WP_000830835 | conjugal transfer pilus assembly protein TraU | traU |
| HS890_RS00145 (pSH696_117_35) | 27384..28016 | - | 633 | WP_001203750 | type-F conjugative transfer system protein TraW | traW |
| HS890_RS00150 (pSH696_117_36) | 28013..28399 | - | 387 | WP_000099693 | type-F conjugative transfer system protein TrbI | - |
| HS890_RS00155 (pSH696_117_37) | 28396..31023 | - | 2628 | WP_001064265 | type IV secretion system protein TraC | virb4 |
| HS890_RS00160 (pSH696_117_39) | 31183..31404 | - | 222 | WP_001278686 | conjugal transfer protein TraR | - |
| HS890_RS00165 (pSH696_117_40) | 31539..32054 | - | 516 | WP_000809885 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS890_RS00170 (pSH696_117_41) | 32051..32302 | - | 252 | WP_001038331 | conjugal transfer protein TrbG | - |
| HS890_RS00175 (pSH696_117_42) | 32295..32615 | - | 321 | WP_001057304 | conjugal transfer protein TrbD | virb4 |
| HS890_RS00180 (pSH696_117_43) | 32602..33162 | - | 561 | WP_000896605 | conjugal transfer pilus-stabilizing protein TraP | - |
| HS890_RS00185 (pSH696_117_44) | 33152..34603 | - | 1452 | WP_000146659 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HS890_RS00190 (pSH696_117_45) | 34603..35331 | - | 729 | WP_001230805 | type-F conjugative transfer system secretin TraK | traK |
| HS890_RS00195 (pSH696_117_46) | 35318..35884 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| HS890_RS00200 (pSH696_117_47) | 35906..36217 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| HS890_RS00205 (pSH696_117_48) | 36222..36584 | - | 363 | WP_000994784 | type IV conjugative transfer system pilin TraA | - |
| HS890_RS00210 | 36617..37012 | - | 396 | WP_001366159 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| HS890_RS00215 (pSH696_117_50) | 37111..37800 | - | 690 | WP_000283383 | conjugal transfer transcriptional regulator TraJ | - |
| HS890_RS00220 (pSH696_117_51) | 37987..38370 | - | 384 | WP_001151528 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HS890_RS00225 (pSH696_117_52) | 38691..39293 | + | 603 | WP_000243710 | transglycosylase SLT domain-containing protein | virB1 |
| HS890_RS00230 (pSH696_117_54) | 39590..40411 | - | 822 | WP_001234423 | DUF932 domain-containing protein | - |
| HS890_RS00235 (pSH696_117_55) | 40531..40817 | - | 287 | Protein_47 | hypothetical protein | - |
| HS890_RS00665 | 41134..41288 | + | 155 | Protein_48 | hypothetical protein | - |
| HS890_RS00670 | 41286..41514 | - | 229 | Protein_49 | hypothetical protein | - |
| HS890_RS00240 (pSH696_117_59) | 41734..41859 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| HS890_RS00675 | 41801..41950 | - | 150 | Protein_51 | plasmid maintenance protein Mok | - |