T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51098..62529
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS880_RS00365 (pSH163_135_73) | 47129..47362 | - | 234 | WP_001191890 | hypothetical protein | - |
| HS880_RS00370 (pSH163_135_74) | 47344..47961 | - | 618 | WP_001249395 | hypothetical protein | - |
| HS880_RS00375 (pSH163_135_75) | 48129..51101 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HS880_RS00380 (pSH163_135_76) | 51098..52963 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HS880_RS00385 (pSH163_135_77) | 52974..53558 | + | 585 | WP_000332868 | hypothetical protein | - |
| HS880_RS00390 (pSH163_135_78) | 53515..54144 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HS880_RS00395 (pSH163_135_79) | 54154..54600 | + | 447 | WP_000122507 | hypothetical protein | - |
| HS880_RS00400 (pSH163_135_80) | 54610..54987 | + | 378 | WP_000869297 | hypothetical protein | - |
| HS880_RS00405 (pSH163_135_81) | 54987..55649 | + | 663 | WP_001231464 | hypothetical protein | - |
| HS880_RS00410 (pSH163_135_82) | 55830..55973 | + | 144 | WP_001275801 | hypothetical protein | - |
| HS880_RS00415 (pSH163_135_83) | 55973..56350 | + | 378 | WP_001326174 | hypothetical protein | - |
| HS880_RS00420 (pSH163_135_84) | 56495..56776 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HS880_RS00425 (pSH163_135_85) | 56773..57399 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HS880_RS00430 (pSH163_135_86) | 57383..58300 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HS880_RS00435 (pSH163_135_87) | 58300..59613 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HS880_RS00440 (pSH163_135_88) | 59610..60188 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS880_RS00445 (pSH163_135_89) | 60192..60584 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HS880_RS00450 (pSH163_135_90) | 60869..61828 | + | 960 | Protein_90 | IS1380-like element ISEcp1 family transposase | - |
| HS880_RS00455 (pSH163_135_91) | 61822..62529 | - | 708 | WP_000637385 | conjugal transfer protein TraC | virb4 |
| HS880_RS00460 (pSH163_135_92) | 62526..63233 | - | 708 | WP_001259346 | DsbC family protein | - |