T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1845..24360
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9000_RS24155 (C9000_24195) | 80..316 | - | 237 | Protein_0 | TraD N-terminal domain-containing protein | - |
| C9000_RS24165 (C9000_24205) | 569..1300 | - | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| C9000_RS24170 (C9000_24210) | 1332..1829 | - | 498 | WP_032143850 | entry exclusion protein | - |
| C9000_RS24175 (C9000_24215) | 1845..4667 | - | 2823 | WP_136788193 | conjugal transfer mating-pair stabilization protein TraG | traG |
| C9000_RS24180 (C9000_24220) | 4664..6037 | - | 1374 | Protein_4 | conjugal transfer pilus assembly protein TraH | - |
| C9000_RS24185 (C9000_24225) | 6037..6417 | - | 381 | WP_001774306 | F-type conjugal transfer protein TrbF | - |
| C9000_RS24190 (C9000_24230) | 6404..6745 | - | 342 | WP_071589462 | P-type conjugative transfer protein TrbJ | - |
| C9000_RS24195 (C9000_24235) | 6675..7220 | - | 546 | WP_001774304 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| C9000_RS24200 (C9000_24240) | 7207..7488 | - | 282 | WP_001595262 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C9000_RS24210 (C9000_24250) | 7867..8232 | - | 366 | WP_001774302 | hypothetical protein | - |
| C9000_RS24215 (C9000_24255) | 8246..8989 | - | 744 | WP_021552507 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| C9000_RS24220 (C9000_24260) | 8982..9239 | - | 258 | WP_001595267 | conjugal transfer protein TrbE | - |
| C9000_RS24225 (C9000_24265) | 9266..11074 | - | 1809 | WP_136788195 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| C9000_RS24230 (C9000_24270) | 11071..11709 | - | 639 | WP_001595269 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| C9000_RS24235 (C9000_24275) | 11718..12710 | - | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| C9000_RS24240 (C9000_24280) | 12707..13339 | - | 633 | WP_021552505 | type-F conjugative transfer system protein TraW | traW |
| C9000_RS24245 (C9000_24285) | 13336..13722 | - | 387 | WP_001774298 | type-F conjugative transfer system protein TrbI | - |
| C9000_RS24250 (C9000_24290) | 13719..16346 | - | 2628 | WP_001064243 | type IV secretion system protein TraC | virb4 |
| C9000_RS24255 (C9000_24295) | 16506..16727 | - | 222 | WP_001774296 | conjugal transfer protein TraR | - |
| C9000_RS24260 (C9000_24300) | 16862..17377 | - | 516 | WP_021552503 | type IV conjugative transfer system lipoprotein TraV | traV |
| C9000_RS24265 (C9000_24305) | 17374..17625 | - | 252 | WP_097516397 | conjugal transfer protein TrbG | - |
| C9000_RS24270 (C9000_24310) | 17637..17834 | - | 198 | WP_021552502 | conjugal transfer protein TrbD | - |
| C9000_RS24275 (C9000_24315) | 17821..18411 | - | 591 | WP_000002787 | conjugal transfer pilus-stabilizing protein TraP | - |
| C9000_RS24280 (C9000_24320) | 18401..19828 | - | 1428 | WP_021552501 | F-type conjugal transfer pilus assembly protein TraB | traB |
| C9000_RS24285 (C9000_24325) | 19828..20556 | - | 729 | WP_001774291 | type-F conjugative transfer system secretin TraK | traK |
| C9000_RS24290 (C9000_24330) | 20543..21109 | - | 567 | WP_001717262 | type IV conjugative transfer system protein TraE | traE |
| C9000_RS24295 (C9000_24335) | 21131..21442 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| C9000_RS24300 (C9000_24340) | 21457..21822 | - | 366 | WP_000340270 | type IV conjugative transfer system pilin TraA | - |
| C9000_RS24305 (C9000_24345) | 21856..22083 | - | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| C9000_RS24310 (C9000_24350) | 22177..22863 | - | 687 | WP_000332492 | PAS domain-containing protein | - |
| C9000_RS24315 (C9000_24355) | 23053..23436 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| C9000_RS24320 (C9000_24360) | 23758..24360 | + | 603 | WP_077633402 | transglycosylase SLT domain-containing protein | virB1 |
| C9000_RS24325 (C9000_24365) | 24656..25477 | - | 822 | WP_021552499 | DUF932 domain-containing protein | - |
| C9000_RS24330 (C9000_24370) | 25596..25883 | - | 288 | WP_001774287 | hypothetical protein | - |
| C9000_RS25715 | 25916..26038 | - | 123 | Protein_34 | single-stranded DNA-binding protein | - |
| C9000_RS25540 (C9000_24375) | 26108..26534 | + | 427 | Protein_35 | hypothetical protein | - |
| C9000_RS24340 (C9000_24380) | 26620..27183 | - | 564 | WP_021552494 | class I SAM-dependent methyltransferase | - |
| C9000_RS24345 (C9000_24385) | 27230..28591 | - | 1362 | WP_000199440 | DUF3560 domain-containing protein | - |
| C9000_RS24350 (C9000_24390) | 28643..28873 | - | 231 | WP_000218642 | hypothetical protein | - |