T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 66926..88767
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTC84_RS25465 (PTC84_25465) | 62479..62865 | - | 387 | WP_015632417 | acyl-CoA thioesterase | - |
| PTC84_RS25470 (PTC84_25470) | 62865..63335 | - | 471 | WP_032441927 | hypothetical protein | - |
| PTC84_RS25475 (PTC84_25475) | 63317..63895 | - | 579 | WP_015632419 | hypothetical protein | - |
| PTC84_RS25480 (PTC84_25480) | 64163..64696 | + | 534 | WP_015632420 | transcription termination/antitermination NusG family protein | - |
| PTC84_RS25485 (PTC84_25485) | 64714..64917 | + | 204 | WP_032495743 | hypothetical protein | - |
| PTC84_RS25490 (PTC84_25490) | 64951..65262 | + | 312 | WP_015632421 | hypothetical protein | - |
| PTC84_RS25495 (PTC84_25495) | 65342..65947 | + | 606 | WP_015632422 | hypothetical protein | - |
| PTC84_RS25500 (PTC84_25500) | 65960..66439 | + | 480 | WP_015632423 | lytic transglycosylase domain-containing protein | - |
| PTC84_RS25505 (PTC84_25505) | 66462..66929 | + | 468 | WP_015632424 | DotD/TraH family lipoprotein | - |
| PTC84_RS25510 (PTC84_25510) | 66926..67744 | + | 819 | WP_015632425 | type IV secretory system conjugative DNA transfer family protein | traI |
| PTC84_RS25515 (PTC84_25515) | 67722..68909 | + | 1188 | WP_032495744 | plasmid transfer ATPase TraJ | virB11 |
| PTC84_RS25520 (PTC84_25520) | 68906..69172 | + | 267 | WP_032441926 | IcmT/TraK family protein | traK |
| PTC84_RS25525 (PTC84_25525) | 69190..72513 | + | 3324 | WP_032495745 | LPD7 domain-containing protein | - |
| PTC84_RS25530 (PTC84_25530) | 72547..72900 | + | 354 | WP_015632427 | hypothetical protein | traL |
| PTC84_RS25535 (PTC84_25535) | 72936..73640 | + | 705 | WP_015632428 | DotI/IcmL/TraM family protein | traM |
| PTC84_RS25540 (PTC84_25540) | 73651..74754 | + | 1104 | WP_015632429 | DotH/IcmK family type IV secretion protein | traN |
| PTC84_RS25545 (PTC84_25545) | 74758..76098 | + | 1341 | WP_015632430 | conjugal transfer protein TraO | traO |
| PTC84_RS25550 (PTC84_25550) | 76104..76823 | + | 720 | WP_015632431 | conjugal transfer protein TraP | traP |
| PTC84_RS25555 (PTC84_25555) | 76833..77366 | + | 534 | WP_015632432 | conjugal transfer protein TraQ | traQ |
| PTC84_RS25560 (PTC84_25560) | 77420..77821 | + | 402 | WP_015632433 | DUF6750 family protein | traR |
| PTC84_RS25565 (PTC84_25565) | 77865..78428 | + | 564 | WP_032495746 | hypothetical protein | traT |
| PTC84_RS25570 (PTC84_25570) | 78438..81485 | + | 3048 | WP_015632435 | conjugal transfer protein | traU |
| PTC84_RS25575 (PTC84_25575) | 81496..82692 | + | 1197 | WP_015632436 | conjugal transfer protein TraW | traW |
| PTC84_RS25580 (PTC84_25580) | 82689..83270 | + | 582 | WP_015632437 | conjugal transfer protein TraX | - |
| PTC84_RS25585 (PTC84_25585) | 83312..85456 | + | 2145 | WP_015632438 | DotA/TraY family protein | traY |
| PTC84_RS25590 (PTC84_25590) | 85522..86145 | + | 624 | WP_015632439 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PTC84_RS25595 (PTC84_25595) | 86247..87665 | + | 1419 | WP_015632440 | hypothetical protein | trbA |
| PTC84_RS25600 (PTC84_25600) | 87676..88767 | + | 1092 | WP_050484136 | thioredoxin fold domain-containing protein | trbB |
| PTC84_RS25605 (PTC84_25605) | 88769..90961 | + | 2193 | WP_015632442 | F-type conjugative transfer protein TrbC | - |
| PTC84_RS25610 (PTC84_25610) | 91007..91312 | + | 306 | WP_015632443 | phospholipase D-like domain-containing protein | - |
| PTC84_RS25615 (PTC84_25615) | 91335..92924 | - | 1590 | WP_015632444 | IS66 family transposase | - |
| PTC84_RS25620 (PTC84_25620) | 92954..93303 | - | 350 | Protein_92 | IS66 family insertion sequence element accessory protein TnpB | - |
| PTC84_RS25625 (PTC84_25625) | 93300..93707 | - | 408 | WP_015632445 | transposase | - |