T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 76333..104315
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTC90_RS31050 (PTC90_31045) | 71443..71790 | + | 348 | WP_064182675 | hypothetical protein | - |
| PTC90_RS31055 (PTC90_31050) | 71879..72109 | + | 231 | WP_060415465 | hypothetical protein | - |
| PTC90_RS31060 (PTC90_31055) | 72156..72989 | + | 834 | WP_060415466 | N-6 DNA methylase | - |
| PTC90_RS31065 (PTC90_31060) | 73229..74224 | + | 996 | WP_077254794 | IS5 family transposase | - |
| PTC90_RS31070 (PTC90_31065) | 74226..75194 | + | 969 | WP_074185243 | IS5 family transposase | - |
| PTC90_RS31075 (PTC90_31070) | 75405..75773 | - | 369 | WP_080848162 | hypothetical protein | - |
| PTC90_RS31080 (PTC90_31075) | 75768..76310 | + | 543 | WP_060415467 | antirestriction protein | - |
| PTC90_RS31085 (PTC90_31080) | 76333..76755 | - | 423 | WP_073972322 | transglycosylase SLT domain-containing protein | virB1 |
| PTC90_RS31090 (PTC90_31085) | 77259..77651 | + | 393 | WP_020805752 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PTC90_RS31095 (PTC90_31090) | 77889..78590 | + | 702 | WP_223174962 | hypothetical protein | - |
| PTC90_RS31100 (PTC90_31095) | 78676..78876 | + | 201 | WP_048289787 | TraY domain-containing protein | - |
| PTC90_RS31105 (PTC90_31100) | 78945..79313 | + | 369 | WP_064343525 | type IV conjugative transfer system pilin TraA | - |
| PTC90_RS31110 (PTC90_31105) | 79327..79632 | + | 306 | WP_064343526 | type IV conjugative transfer system protein TraL | traL |
| PTC90_RS31115 (PTC90_31110) | 79648..80214 | + | 567 | WP_064359954 | type IV conjugative transfer system protein TraE | traE |
| PTC90_RS31120 (PTC90_31115) | 80201..80935 | + | 735 | WP_099743468 | type-F conjugative transfer system secretin TraK | traK |
| PTC90_RS31125 (PTC90_31120) | 80935..82356 | + | 1422 | WP_053390199 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PTC90_RS31130 (PTC90_31125) | 82349..82783 | + | 435 | WP_020322358 | conjugal transfer protein TraP | - |
| PTC90_RS31135 (PTC90_31130) | 82817..83401 | + | 585 | WP_064343530 | type IV conjugative transfer system lipoprotein TraV | traV |
| PTC90_RS31140 (PTC90_31135) | 84014..84202 | + | 189 | WP_053390286 | hypothetical protein | - |
| PTC90_RS31145 (PTC90_31140) | 84286..84687 | + | 402 | WP_064343532 | hypothetical protein | - |
| PTC90_RS31150 (PTC90_31145) | 84684..84983 | + | 300 | WP_053390308 | hypothetical protein | - |
| PTC90_RS31155 (PTC90_31150) | 85071..85454 | + | 384 | WP_042946290 | hypothetical protein | - |
| PTC90_RS31160 (PTC90_31155) | 85547..88186 | + | 2640 | WP_064343533 | type IV secretion system protein TraC | virb4 |
| PTC90_RS31165 (PTC90_31160) | 88186..88578 | + | 393 | WP_064343534 | type-F conjugative transfer system protein TrbI | - |
| PTC90_RS31170 (PTC90_31165) | 88575..89201 | + | 627 | WP_064343535 | type-F conjugative transfer system protein TraW | traW |
| PTC90_RS31175 (PTC90_31170) | 89245..90204 | + | 960 | WP_229295972 | conjugal transfer pilus assembly protein TraU | traU |
| PTC90_RS31180 (PTC90_31175) | 90217..90864 | + | 648 | WP_064343536 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PTC90_RS31185 (PTC90_31180) | 90861..91244 | + | 384 | WP_053390297 | hypothetical protein | - |
| PTC90_RS31190 (PTC90_31185) | 91241..93196 | + | 1956 | WP_080848160 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PTC90_RS31195 (PTC90_31190) | 93228..93488 | + | 261 | WP_053390216 | hypothetical protein | - |
| PTC90_RS31200 (PTC90_31195) | 93481..94092 | + | 612 | WP_053390217 | hypothetical protein | - |
| PTC90_RS31205 (PTC90_31200) | 94082..94324 | + | 243 | WP_053390218 | conjugal transfer protein TrbE | - |
| PTC90_RS31210 (PTC90_31205) | 94370..94696 | + | 327 | WP_053390219 | hypothetical protein | - |
| PTC90_RS31215 (PTC90_31210) | 94717..95469 | + | 753 | WP_053390220 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PTC90_RS31220 (PTC90_31215) | 95480..95716 | + | 237 | WP_053390221 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PTC90_RS31225 (PTC90_31220) | 95691..96251 | + | 561 | WP_039698500 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PTC90_RS31230 (PTC90_31225) | 96238..97608 | + | 1371 | WP_080848158 | conjugal transfer pilus assembly protein TraH | traH |
| PTC90_RS31235 (PTC90_31230) | 97608..100451 | + | 2844 | WP_049078361 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PTC90_RS31240 (PTC90_31235) | 100457..100972 | + | 516 | WP_049078360 | conjugal transfer protein TraS | - |
| PTC90_RS31245 (PTC90_31240) | 101035..101781 | + | 747 | WP_049078359 | hypothetical protein | - |
| PTC90_RS31250 (PTC90_31245) | 102021..104315 | + | 2295 | WP_080848157 | type IV conjugative transfer system coupling protein TraD | virb4 |