T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 62714..87905
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTC90_RS30015 (PTC90_30010) | 58739..58972 | - | 234 | WP_001191892 | hypothetical protein | - |
| PTC90_RS30020 (PTC90_30015) | 58954..59571 | - | 618 | WP_001249396 | hypothetical protein | - |
| PTC90_RS30025 (PTC90_30020) | 59739..62717 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| PTC90_RS30030 (PTC90_30025) | 62714..64579 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| PTC90_RS30035 (PTC90_30030) | 64629..65174 | + | 546 | WP_000228720 | hypothetical protein | - |
| PTC90_RS30040 (PTC90_30035) | 65131..65760 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| PTC90_RS30045 (PTC90_30040) | 65770..66216 | + | 447 | WP_000122506 | hypothetical protein | - |
| PTC90_RS30050 (PTC90_30045) | 66226..66603 | + | 378 | WP_000869261 | hypothetical protein | - |
| PTC90_RS30055 (PTC90_30050) | 66603..67265 | + | 663 | WP_001231463 | hypothetical protein | - |
| PTC90_RS30060 (PTC90_30055) | 67446..67589 | + | 144 | WP_001275801 | hypothetical protein | - |
| PTC90_RS30065 (PTC90_30060) | 67601..67966 | + | 366 | WP_001052531 | hypothetical protein | - |
| PTC90_RS30070 (PTC90_30065) | 68111..68392 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PTC90_RS30075 (PTC90_30070) | 68389..69015 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PTC90_RS30080 (PTC90_30075) | 68999..69916 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| PTC90_RS30085 (PTC90_30080) | 69916..71229 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| PTC90_RS30090 (PTC90_30085) | 71226..71804 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PTC90_RS30095 (PTC90_30090) | 71808..72200 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PTC90_RS30100 (PTC90_30095) | 72401..77932 | + | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| PTC90_RS30105 (PTC90_30100) | 78081..78788 | + | 708 | WP_001259347 | DsbC family protein | - |
| PTC90_RS30110 (PTC90_30105) | 78785..81232 | + | 2448 | WP_273863456 | type IV secretion system protein TraC | virb4 |
| PTC90_RS30115 (PTC90_30110) | 81247..81564 | + | 318 | WP_000351984 | hypothetical protein | - |
| PTC90_RS30120 (PTC90_30115) | 81561..82091 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| PTC90_RS30125 (PTC90_30120) | 82054..83319 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| PTC90_RS30130 (PTC90_30125) | 83316..83987 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| PTC90_RS30135 (PTC90_30130) | 83987..84991 | + | 1005 | WP_043940352 | TraU family protein | traU |
| PTC90_RS30140 (PTC90_30135) | 85107..87905 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| PTC90_RS30145 (PTC90_30140) | 87944..88804 | - | 861 | WP_000709517 | hypothetical protein | - |
| PTC90_RS30150 (PTC90_30145) | 88927..89568 | - | 642 | WP_000796664 | hypothetical protein | - |
| PTC90_RS30155 (PTC90_30150) | 89862..90182 | + | 321 | WP_000547566 | hypothetical protein | - |
| PTC90_RS30160 (PTC90_30155) | 90486..90671 | + | 186 | WP_001186917 | hypothetical protein | - |
| PTC90_RS30165 (PTC90_30160) | 90891..91859 | + | 969 | WP_000085162 | AAA family ATPase | - |
| PTC90_RS30170 (PTC90_30165) | 91870..92778 | + | 909 | WP_000739139 | hypothetical protein | - |