T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 149968..178579
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTC90_RS29265 (PTC90_29260) | 149968..152280 | - | 2313 | WP_135715266 | type IV conjugative transfer system coupling protein TraD | virb4 |
| PTC90_RS29270 (PTC90_29265) | 152336..152449 | - | 114 | Protein_151 | hypothetical protein | - |
| PTC90_RS29275 (PTC90_29270) | 152640..153371 | - | 732 | WP_032415736 | conjugal transfer complement resistance protein TraT | - |
| PTC90_RS29280 (PTC90_29275) | 153623..154225 | - | 603 | WP_023280878 | hypothetical protein | - |
| PTC90_RS29285 (PTC90_29280) | 154249..157071 | - | 2823 | WP_023320108 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PTC90_RS29290 (PTC90_29285) | 157071..158450 | - | 1380 | WP_011977731 | conjugal transfer pilus assembly protein TraH | traH |
| PTC90_RS29295 (PTC90_29290) | 158428..158871 | - | 444 | WP_032436741 | F-type conjugal transfer protein TrbF | - |
| PTC90_RS29300 (PTC90_29295) | 158916..159473 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PTC90_RS29305 (PTC90_29300) | 159445..159684 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PTC90_RS29310 (PTC90_29305) | 159695..160447 | - | 753 | WP_015065637 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PTC90_RS29315 (PTC90_29310) | 160468..160794 | - | 327 | WP_032436744 | hypothetical protein | - |
| PTC90_RS32890 | 160840..161025 | - | 186 | WP_032436745 | hypothetical protein | - |
| PTC90_RS29320 (PTC90_29315) | 161022..161258 | - | 237 | WP_032436746 | conjugal transfer protein TrbE | - |
| PTC90_RS29325 (PTC90_29320) | 161290..163245 | - | 1956 | WP_023307537 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PTC90_RS29330 (PTC90_29325) | 163304..163942 | - | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PTC90_RS29335 (PTC90_29330) | 163955..164914 | - | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| PTC90_RS29340 (PTC90_29335) | 164958..165584 | - | 627 | WP_023307538 | type-F conjugative transfer system protein TraW | traW |
| PTC90_RS29345 (PTC90_29340) | 165584..165973 | - | 390 | WP_032436749 | type-F conjugative transfer system protein TrbI | - |
| PTC90_RS29350 (PTC90_29345) | 165973..168612 | - | 2640 | WP_016528865 | type IV secretion system protein TraC | virb4 |
| PTC90_RS29355 (PTC90_29350) | 168684..169082 | - | 399 | WP_072158599 | hypothetical protein | - |
| PTC90_RS29360 (PTC90_29355) | 169090..169380 | - | 291 | WP_023307542 | hypothetical protein | - |
| PTC90_RS29365 (PTC90_29360) | 169377..169781 | - | 405 | WP_023307543 | hypothetical protein | - |
| PTC90_RS29370 (PTC90_29365) | 169848..170165 | - | 318 | WP_023307544 | hypothetical protein | - |
| PTC90_RS29375 (PTC90_29370) | 170166..170384 | - | 219 | WP_004171484 | hypothetical protein | - |
| PTC90_RS29380 (PTC90_29375) | 170408..170698 | - | 291 | WP_004152596 | hypothetical protein | - |
| PTC90_RS29385 (PTC90_29380) | 170703..171113 | - | 411 | WP_004152597 | lipase chaperone | - |
| PTC90_RS29390 (PTC90_29385) | 171245..171814 | - | 570 | WP_273863303 | type IV conjugative transfer system lipoprotein TraV | traV |
| PTC90_RS29395 (PTC90_29390) | 171837..172433 | - | 597 | WP_004152599 | conjugal transfer pilus-stabilizing protein TraP | - |
| PTC90_RS29400 (PTC90_29395) | 172426..173850 | - | 1425 | WP_004152600 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PTC90_RS29405 (PTC90_29400) | 173850..174590 | - | 741 | WP_004152601 | type-F conjugative transfer system secretin TraK | traK |
| PTC90_RS29410 (PTC90_29405) | 174577..175143 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| PTC90_RS29415 (PTC90_29410) | 175163..175468 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| PTC90_RS29420 (PTC90_29415) | 175482..175850 | - | 369 | WP_004178060 | type IV conjugative transfer system pilin TraA | - |
| PTC90_RS29425 (PTC90_29420) | 175904..176275 | - | 372 | WP_004208838 | TraY domain-containing protein | - |
| PTC90_RS29430 (PTC90_29425) | 176359..177054 | - | 696 | WP_004178061 | transcriptional regulator TraJ family protein | - |
| PTC90_RS29435 (PTC90_29430) | 177268..177660 | - | 393 | WP_004178062 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PTC90_RS29440 (PTC90_29435) | 178094..178579 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| PTC90_RS29445 (PTC90_29440) | 178612..178941 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| PTC90_RS29450 (PTC90_29445) | 178974..179795 | - | 822 | WP_004178064 | DUF932 domain-containing protein | - |
| PTC90_RS29455 (PTC90_29450) | 180625..181038 | - | 414 | WP_004152722 | helix-turn-helix domain-containing protein | - |
| PTC90_RS29460 (PTC90_29455) | 181039..181317 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| PTC90_RS29465 (PTC90_29460) | 181307..181627 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PTC90_RS29470 (PTC90_29465) | 181708..181932 | - | 225 | WP_004152719 | hypothetical protein | - |
| PTC90_RS29475 (PTC90_29470) | 181943..182155 | - | 213 | WP_004152718 | hypothetical protein | - |
| PTC90_RS29480 (PTC90_29475) | 182216..182572 | - | 357 | WP_004152717 | hypothetical protein | - |
| PTC90_RS29485 (PTC90_29480) | 183208..183558 | - | 351 | WP_004182068 | hypothetical protein | - |