T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43449..59362
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS046_RS23460 (PS046_23460) | 39383..39946 | + | 564 | WP_021548773 | class I SAM-dependent methyltransferase | - |
| PS046_RS23465 (PS046_23465) | 40035..40457 | - | 423 | Protein_43 | hypothetical protein | - |
| PS046_RS23470 (PS046_23470) | 40736..41740 | - | 1005 | WP_273813360 | IS110 family transposase | - |
| PS046_RS23475 (PS046_23475) | 41924..42211 | + | 288 | WP_085457081 | hypothetical protein | - |
| PS046_RS23480 (PS046_23480) | 42332..43153 | + | 822 | WP_032342235 | DUF932 domain-containing protein | - |
| PS046_RS23485 (PS046_23485) | 43449..44051 | - | 603 | WP_207610769 | transglycosylase SLT domain-containing protein | virB1 |
| PS046_RS23490 (PS046_23490) | 44374..44757 | + | 384 | WP_161527390 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS046_RS23495 (PS046_23495) | 44952..45623 | + | 672 | WP_059257109 | conjugal transfer transcriptional regulator TraJ | - |
| PS046_RS23500 (PS046_23500) | 45761..45988 | + | 228 | WP_072247434 | conjugal transfer relaxosome protein TraY | - |
| PS046_RS23505 (PS046_23505) | 46021..46380 | + | 360 | WP_059257108 | type IV conjugative transfer system pilin TraA | - |
| PS046_RS23510 (PS046_23510) | 46395..46706 | + | 312 | WP_000012118 | type IV conjugative transfer system protein TraL | traL |
| PS046_RS23515 (PS046_23515) | 46728..47294 | + | 567 | WP_059259957 | type IV conjugative transfer system protein TraE | traE |
| PS046_RS23520 (PS046_23520) | 47307..48008 | + | 702 | WP_273813362 | type-F conjugative transfer system secretin TraK | traK |
| PS046_RS23525 (PS046_23525) | 48008..49435 | + | 1428 | WP_273813352 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PS046_RS23530 (PS046_23530) | 49425..50009 | + | 585 | WP_273813354 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS046_RS23535 (PS046_23535) | 49996..50316 | + | 321 | WP_273813356 | conjugal transfer protein TrbD | - |
| PS046_RS23540 (PS046_23540) | 50313..50825 | + | 513 | WP_161527393 | type IV conjugative transfer system lipoprotein TraV | traV |
| PS046_RS23545 (PS046_23545) | 50960..51022 | + | 63 | Protein_59 | conjugal transfer protein TraR | - |
| PS046_RS23550 (PS046_23550) | 51076..51753 | + | 678 | WP_001339397 | IS66-like element accessory protein TnpA | - |
| PS046_RS23555 (PS046_23555) | 51753..52100 | + | 348 | WP_000624622 | IS66 family insertion sequence element accessory protein TnpB | - |
| PS046_RS23560 (PS046_23560) | 52120..53691 | + | 1572 | WP_273811869 | IS66 family transposase | - |
| PS046_RS23565 (PS046_23565) | 53722..54213 | + | 492 | Protein_63 | complement resistance protein TraT | - |
| PS046_RS23570 (PS046_23570) | 54481..56052 | - | 1572 | WP_273811869 | IS66 family transposase | - |
| PS046_RS23575 (PS046_23575) | 56072..56419 | - | 348 | WP_273813306 | IS66 family insertion sequence element accessory protein TnpB | - |
| PS046_RS23580 (PS046_23580) | 56419..57096 | - | 678 | WP_001339397 | IS66-like element accessory protein TnpA | - |
| PS046_RS23585 (PS046_23585) | 57173..59362 | + | 2190 | WP_273813308 | type IV conjugative transfer system coupling protein TraD | virb4 |
| PS046_RS23590 (PS046_23590) | 59371..59769 | - | 399 | WP_059257082 | tRNA(fMet)-specific endonuclease VapC | - |
| PS046_RS23595 (PS046_23595) | 59769..59996 | - | 228 | WP_000450526 | toxin-antitoxin system antitoxin VapB | - |